UFO02559.5prime Sequence
733 bp (641 high quality bases) assembled on 2009-01-14
> UFO02559.5prime
CAGTCGACATGGTATTCATAACGAAATTCGCAAGGATTGGGCTGCAGGCC
GCCCGCCAGCTTAGTGTCACGCCCCTTGGCGCCGTCCAGGCTCGCGCCAT
TCACCTGACAAGCCTTCTAGCCAAAGAACGCCGATACACAAACAAACACG
AGTGGGTGGAGGTGGTATCCGGCAGCAATGCCATAGTAGGCATCTCCAGC
TACGCCCAGGAGGCTCTCGGGGATGTGGTGTTCGCCCAACTCCCAGAACC
CGGCACGGAACTCAAGCAGGATGACGAATGTGGGGCCCTGGAGAGCGTTA
AAGCGGCTAGCGAGGTGTATTCACCCGTTAGTGGCAAGGTAATTGAAAAG
AATGCCGAGGTGGAGGACACACCGGCCCTAGTCAACAGCAGTTGCTATGA
GAAGGGCTGGCTTTTCAAGGTGGACCTGAAGAATCCCAAGGAACTCGAAG
CCCTTATGACCGAGGATCAGTACAAAGCCTTCCTGAGCAGCAGTGGGGAT
CACGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGG
TCATAATCATAATCATAATCATATCATATCACAACTAGCCTAGGAGATCC
TGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAACGCCCGCGCACGA
GCGTTCTGAACAATCAGAATGGAGTCTGAGTCATACTGATCTATCAACAG
GAGTCAGCGAGCTCGAATCATACCCCCGCCTGC
UFO02559.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:50:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ppl-RA | 900 | CG7758-RA | 205..699 | 9..503 | 2475 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:50:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21280850..21281131 | 406..125 | 1410 | 100 | Minus |
| 3L | 28110227 | 3L | 21281185..21281302 | 126..9 | 590 | 100 | Minus |
| 3L | 28110227 | 3L | 21280692..21280790 | 503..405 | 495 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:50:35 has no hits.
UFO02559.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:17:15 Download gff for
UFO02559.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ppl-RA | 200..694 | 9..503 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:41:54 Download gff for
UFO02559.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ppl-RA | 205..699 | 9..503 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:30 Download gff for
UFO02559.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ppl-RA | 205..699 | 9..503 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:42:30 Download gff for
UFO02559.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21280851..21281129 | 127..405 | 100 | <- | Minus |
| 3L | 21281185..21281302 | 9..126 | 100 | | Minus |
| 3L | 21280692..21280789 | 406..503 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:41:54 Download gff for
UFO02559.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21273792..21273889 | 406..503 | 100 | <- | Minus |
| arm_3L | 21273951..21274229 | 127..405 | 100 | <- | Minus |
| arm_3L | 21274285..21274402 | 9..126 | 100 | | Minus |
