UFO02561.5prime Sequence
943 bp (820 high quality bases) assembled on 2009-01-14
> UFO02561.5prime
CAGTCGACATGATGCAGCCGAGACTAGTGATTTTGGGTCTGATCGGATTG
ACGGCGGTGGGCATGTGCCACGCCCAGGGACGCATCATGGGAGGGGAGGA
CGCGGACGCCACAGCCACGACCTTCACCGCCTCCTTGCGGGTGGACAATG
CCCATGTGTGCGGCGGTAGCATTCTCTCCCAGACCAAAATCCTGACCACC
GCCCACTGTGTGCATCGCGATGGAAAGCTAATCGATGCCAGTCGCCTGGC
GTGCCGCGTGGGCAGTACCAACCAGTATGCTGGTGGCAAGATTGTCAACG
TGGAATCGGTTGCAGTGCATCCGGACTACTATAATCTGAACAACAACCTG
GCCGTGATCACGCTGAGCTCTGAGCTGACCTACACCGATCGGATCACTGC
CATCCCGCTGGTCGCCAGCGGAGAGGCACTGCCCGCCGAGGGATCGGAGG
TGATCGTGGCCGGCTGGGGACGCACCAGCGACGGCACCAACTCCTACAAG
ATCCGTCAGATATCGCTAAAGGTGGCCCCGGAGGCGACCTGCCTGGATGC
GTACAGCGATCACGACGAGCAGAGCTTCTGCCTCGCCCACGAGCTGAAGG
AGGGCACCTGCCACGGAGACGGAGGCGGTGGTGCCATCTATGGCAACACG
TTGATCGGGCTGACCAACTTTGTGGTGGGCGCCTGTGGCTCCCGCTATCC
GGATGTCTTTGTCCGACTCTCCAGCTACGCGGATGGATCCAGGAGCAGAT
CGCCGCAAGCTTTCTAGACCATTCGTTTGGCGCCGCGGGCCCAGGTAGTG
GTCATATCATATCATATCATATCATATCACACTAGCCTAGGAGATCCTGT
CATGACTAGTGCTGATTCTCCCCAATAAAAACGCCGGCGCACGAGCGTTG
ACATCGATGGAGTTCTGAGGTCATACTGATTATCACGGATCAG
UFO02561.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:51:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| spheroide-RA | 1263 | CG9675-RA | 76..822 | 9..754 | 3710 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:51:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16700887..16701412 | 754..230 | 2580 | 99.8 | Minus |
| X | 23542271 | X | 16701677..16701897 | 229..9 | 1105 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:51:03 has no hits.
UFO02561.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:18:51 Download gff for
UFO02561.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spheroide-RA | 60..806 | 9..754 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:42:13 Download gff for
UFO02561.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spheroide-RA | 76..822 | 9..754 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:45 Download gff for
UFO02561.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spheroide-RA | 76..822 | 9..754 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:42:45 Download gff for
UFO02561.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16700887..16701412 | 230..754 | 99 | <- | Minus |
| X | 16701677..16701897 | 9..229 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:42:13 Download gff for
UFO02561.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16594920..16595445 | 230..754 | 99 | <- | Minus |
| arm_X | 16595710..16595930 | 9..229 | 100 | | Minus |
