UFO02563.5prime Sequence
988 bp (852 high quality bases) assembled on 2009-01-14
> UFO02563.5prime
CAGTCGACATGAGGCCATACCAAGTAGTTTGCATCGTAGGTAAGTCTCGC
ATATCGAAGCTGACCAGTTCTGGAAGTCCCATAATTAACTGGTATGCGCC
CATTTCCTTTTTAGCAGTAGCAGCTCTGCTGCTTTTGGAGGCGATTCCCG
CGGATGCAAAGCGGCGCAAGCACAAGGGCTCCGATCATCACTATGAAAAG
TCTGATCCCCACAAGACCAAGACAAAGACCAAGTGGTCTAGCTCCACGGA
TTTGGCTGGAAACACTCCAATTTCCACCGAAGAGCACGGCTACTATGTAA
AGCGCACCTTTGCGGCTCCCGGTGAGATTGGAGCCGCACAGAAGCGTCTA
AGTCCCCCCTATTTGGCCATTCCCATCGCCTGGTTCAGCTGTGAGTCGGG
CCAGAAGAATTGCCAGTCTTCCAATTCCGCGGCTATCAACAGTGCCGCGC
AGTCCTTGAGCGAGGGCTATCTGTGCGACGATGATTGCGATGAACTGTAC
GAGCCCATCTGCGGCAGGACCACCTCAGAGGTGGCCGTTTTCTACAACAA
GTGCAAGTTGGGTGTAGCCAAGTGCCGATCCCACGGTCTTTGGACGGACT
TCGCCTATGCCGAGTGCCAGGCGAAATATCCGCAGGAAACTGCCTATGCC
GACAAGAAGTTCCGGTCATCGCCTTATTTCCGGGATGCGGCCATCGTGGA
GCAATTGAAGCTGGAGGAGGAGAAGCGTAAGCAGGAGGAGGACACACAGC
TGGAGAGGAGCAAAGAGAGGAGAAGCTGAGAAAATAGACGAGAGACAGCA
GCGAAGCAGCGAGGAGAGATGACCAAAGAAAACAGCAGACATCCCTTTCC
CTATGCACAGAAGAAAGTGATCCACCCAGAGCAGTGCAGTTCTATCAGTA
GCAGTCAACAGTTCAGTTTGGGCTGCAAGACGACGAGATCGCTATGCGCT
ATGCCATGAAGACCTCCCAGCCAACTCTGAATCGCCCC
UFO02563.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:30:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpL1-RB | 1230 | CG10717-RB | 34..964 | 7..905 | 3890 | 96.5 | Plus |
| ImpL1-RA | 1160 | CG10717-RA | 69..894 | 112..905 | 3365 | 96 | Plus |
| ImpL1-RC | 1157 | CG10717-RC | 70..891 | 116..905 | 3345 | 96 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:30:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13382803..13383538 | 7..742 | 3680 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:30:27 has no hits.
UFO02563.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:18:49 Download gff for
UFO02563.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL1-RB | 11..932 | 1..892 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:48:02 Download gff for
UFO02563.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL1-RB | 27..948 | 1..892 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:08:54 Download gff for
UFO02563.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL1-RB | 27..948 | 1..892 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:08:54 Download gff for
UFO02563.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13382796..13383717 | 1..892 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:48:02 Download gff for
UFO02563.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13375896..13376817 | 1..892 | 96 | | Plus |
