UFO02564.5prime Sequence
895 bp (787 high quality bases) assembled on 2009-01-14
> UFO02564.5prime
CAGTCGACATGGACTCTGATCCTGAAATCGAGTTCATTGAAAAGGACAGC
GGCATGTCGTCGTTAGGCGGCAGCAAGGACGAGACGCCGGAGCGTCGGGC
AGTGGCTGCCACCTCCAATGATCCGCAACGCGAGAACTACGATGATGAGC
CCGATGAGACGGCATCCGAGCGCTTCTGGGGACTAACCGAGATGTTCCCG
GAGCCAGTGAGGAATGCAGTCGGCGCCGTGAGCAGCGCCACGGTGAAGAG
CGTCAAGGGCTTCTACTCGTTCTCGTGCAACGCCAGCTGGATATTCTTCA
CCAGCGCGGTTATCCTGTTCGCCCCGGTCATCTTCGAGACGGAGCGCGCC
CAGATGGAGGAGCTGCACAAGTCGCAGCAGAAGCAGGTGCTTCTTGGACC
CGGCAGTGCGATGGGTCCTGGAGGGCCGTCGCCCAGCTTACCCTTGATTC
GTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGT
CATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATC
CTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGC
AACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGA
TCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCT
GCACTCATCGCAGTACTGTGTAATTCATTAAGCATTCTGCGACATGGAGC
ATCACAAACGGCATGATGACTGATCGCAGCGCATCAGCACTGTCGCTTGC
GTTTAATATTTGCCCATGTGAACGGGCGAGAGTGTCAATGCCACGTTATC
AAACTGGTGACTCACCAGGATGCTGAAACGAAACATTTCCATAAC
UFO02564.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:22:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mge-RA | 1088 | CG14981-RA | 271..714 | 9..452 | 2220 | 100 | Plus |
| mge-RB | 886 | CG14981-RB | 176..517 | 111..452 | 1710 | 100 | Plus |
| mge-RC | 1313 | CG14981-RC | 634..939 | 147..452 | 1530 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:22:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3908226..3908531 | 452..147 | 1530 | 100 | Minus |
| 3L | 28110227 | 3L | 3909221..3909322 | 110..9 | 510 | 100 | Minus |
| 3L | 28110227 | 3L | 3909003..3909039 | 147..111 | 185 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:22:53 has no hits.
UFO02564.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:18:48 Download gff for
UFO02564.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mge-RA | 269..715 | 9..456 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:44 Download gff for
UFO02564.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mge-RA | 271..717 | 9..456 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:14:31 Download gff for
UFO02564.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mge-RA | 271..717 | 9..456 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:14:31 Download gff for
UFO02564.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3908223..3908531 | 147..456 | 99 | <- | Minus |
| 3L | 3909004..3909039 | 111..146 | 100 | <- | Minus |
| 3L | 3909221..3909322 | 9..110 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:44 Download gff for
UFO02564.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3908223..3908531 | 147..456 | 99 | <- | Minus |
| arm_3L | 3909004..3909039 | 111..146 | 100 | <- | Minus |
| arm_3L | 3909221..3909322 | 9..110 | 100 | | Minus |
