UFO02566.5prime Sequence
1036 bp (895 high quality bases) assembled on 2009-01-14
> UFO02566.5prime
CAGTCGACATGGCTGCCCTGGCCAGCTTGACTGCCCAGTACACGGATTCC
GAGAACGAGGGCGATGCTAGTCCGGATTCACAAAACTCCACGGCGTCCCT
GGTAATCATACCGCCCAAGCGACCCACGCCGACGCCCACCAAACAGGACG
AAGAAAGCAAGCGATCTAAGGAGAAGAAAAAGAAGCGGGCCAAGAAGGTG
CGTCGGTTGGTGAGCTACCAGGATGACACCCTGATTTCTGACGAGGACGA
GGACCGCGCCGCAGCGTCCTCTAGTGAAGAGGAGTCCAGCAGTGGCGACG
AGAGCAATAGTTCCAATTCCCAGAGCGAAGACAGTCCCAAAGCCAAGGAT
AAAAGCAATGCTGGTAGTGGTTCCAAGGACGGGGACACGCCCATGGAGGT
GGACGAGGAGCCGGCATGTTTCCCGGTCGAAGAACGCACGGCTGAGAGCT
ACGAAAAGGATGCCAAGTACGCCAAGTACAAGTTCCAGCTGCCACCCGAG
CCAAAGGGGAAGCCGTCCGCCGAATTAGTGGCCAAAATCACTAAAATGTA
CACAAAGATGAACCAGACCAATATGGACATGAATCGCGTAATACAGGATC
GCAAGGAATTTCGCAATCCCAGCATATATGACAAACTAATAAGCTTTTGC
GACATCAACGAGTTCGGTACCAACTATCCGCCCGAGATCTATGATCCTTT
GCAGTGGGGCGAGGAGTCCTATTACGAGTCCTTGGCGGCGGTCCAGAAAA
CGGAGATGGTGAAGCGGCAGAAAGATCGCAAGGACATGGACAAGTGAGCA
GCCACTGCGTTGGCCCGGAAAGTCGAGGAGGAGCCAAAAGCGCAAATCCA
AGTGGGATCACCGGCACCTTCGTCAACGTGTAGACACTCTCGGCTCTACC
ACCACGTACGGCACCAGGCACTGTCATTCGCTTTGATCGCTGCGAGAGCA
GCGTTGCAGCTTTCTAGACATCGTGGCGCGGGCCCAGTATGGCTATCAAA
CTAATCTATCTATTCCACTAGCTAGGATCTGCTATG
UFO02566.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:27:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2063-RA | 1195 | CG2063-RA | 128..1085 | 9..943 | 4265 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:27:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9285614..9286353 | 833..97 | 3555 | 99.3 | Minus |
| 2R | 25286936 | 2R | 9286413..9286507 | 103..9 | 475 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:27:36 has no hits.
UFO02566.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:17:03 Download gff for
UFO02566.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2063-RA | 116..1080 | 1..943 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:18 Download gff for
UFO02566.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2063-RA | 121..1085 | 1..943 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:02:22 Download gff for
UFO02566.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2063-RA | 121..1085 | 1..943 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:02:22 Download gff for
UFO02566.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9285603..9286348 | 102..842 | 99 | <- | Minus |
| 2R | 9286415..9286514 | 1..101 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:18 Download gff for
UFO02566.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5173108..5173853 | 102..842 | 99 | <- | Minus |
| arm_2R | 5173920..5174019 | 1..101 | 96 | | Minus |
