Clone UFO02567 Report

Search the DGRC for UFO02567

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:25
Well:67
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG6271-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO02567.5prime Sequence

1040 bp (929 high quality bases) assembled on 2009-01-14

> UFO02567.5prime
CAGTCGACATGAAGACTTTCCTGATTTTGGCAATCTTTGCTCTAGCCGCT
TCGGCTTATGCTCTGGAGGAATCCGAGCGCGTCAACGGGGAGAACGGCTG
GTACGTTCCCCAGCAGGACGGCTCCTTTGAGTGGGTGGACATGGATGTCG
CTGAGGAGTGGATGGAGGCCCAGGAGAAGCTTGAGGGCCGTGGCTTGACC
ACCGTTCCCGTGAACTTCTACCTCTTCACGCCCAAGAACCCCTCGAGCAG
CAAGCACATCTACGCCACTACCAAGTCCATTTCCAAGTCCAACTTCAACC
CTGCTCACCCCACCCGTTTCGTGATCCACGGCTGGACCCAGAGCTACTTG
AACAGCATGAACTCGGACATCCGCAAGGCATTCCTCTCTAAGGGAGACTA
CAACGTGATCGTTGTTGACTGGGCCCGTGCCCGTTCCGTGGATTATGCCA
CCTCTGTTATGGCTGTCGCTGCCACCGGAAAGAAGGTTGCCAAGATGATT
AACTTCCTGAAGGACAACCACGGTCTGAATCTTAATGACGTATATGTGAT
TGGTCACAGCTTGGGCGCCCATGTGGCTGGATATGCCGGCAAGAACACCG
ACGGCCAGGTGCACACCATCATTGGTCTGGACCCCGCCCTGCCCCTCTTC
AGCTACAACAAGCCCAACAAACGTCTGAATTCCGACGATGCCTGGTATGT
GGAGTCTATCCAGACCAACGGTGGCACTCTGGGATTCCTGAAGCCCATCG
GCAAGGGAGCTTTCTATCCCAACGGAGGAAAGACCCAGCCCGGCTGCCCT
CTGGATGTGACTGGAGCCTGCTCCCACGGACGCTCACAACCTACTACGCC
GAGGCCGTCTCGAGACACTTCGACCATGAGTGCGAGACTACGAGAGCGTG
CAGAGTGCGAGCACTACTCAGCGTCGCATGGACTGATCACGCTACTGTCG
AGGGTGACTTCTATTGTGCCGTGAACGCAGCTCCCTCCGCATGATACGCA
GCCTTTAACATCGTTGGCCGCGGGCCAGGTATGCTATTAT

UFO02567.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:14:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG6271-RA 1072 CG6271-RA 22..1040 9..995 4280 96.5 Plus
CG6277-RA 1085 CG6277-RA 31..924 9..894 2600 86.6 Plus
CG6283-RA 1083 CG6283-RA 319..871 311..859 840 77.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:13:58
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 27025165..27025979 861..48 4010 99.8 Minus
3R 32079331 3R 27022272..27023067 861..67 2415 87.2 Minus
3R 32079331 3R 27020450..27021002 859..311 790 77 Minus
3R 32079331 3R 27006123..27006439 858..546 690 82.6 Minus
3R 32079331 3R 27017480..27017623 767..624 225 77.1 Minus
3R 32079331 3R 27026049..27026088 48..9 200 100 Minus
3R 32079331 3R 27019251..27019307 446..390 195 89.5 Minus
Blast to na_te.dros performed on 2014-11-28 21:13:59 has no hits.

UFO02567.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:17:00 Download gff for UFO02567.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6271-RA 13..866 9..861 99 == Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:00:10 Download gff for UFO02567.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6271-RA 22..875 9..861 99 == Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:46:03 Download gff for UFO02567.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6271-RA 22..875 9..861 99 == Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:46:03 Download gff for UFO02567.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 27022272..27022292 841..861 100 -> Minus
3R 27025186..27025978 49..840 99 <- Minus
3R 27026049..27026088 9..48 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:00:10 Download gff for UFO02567.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 22847994..22848014 841..861 100 -> Minus
arm_3R 22850908..22851700 49..840 99 <- Minus
arm_3R 22851771..22851810 9..48 100   Minus