UFO02576.5prime Sequence
945 bp (852 high quality bases) assembled on 2009-01-14
> UFO02576.5prime
CAGTCGACATGGATCAACTCAAACTCAGACCTTGTAACTGCCTTACCGCA
CATCCACTGGCAGAGTGGGTGTGGGTGGAATGTGAGCGGCTGTGCACCCT
TCGTCTTGCCAGTTTTCGAAAAGGGTTCTCCGAAAAGGGTTGCCACCGCA
CCCCGATGCCCATTGAGGACTCATGGAGCAAACGGTTTCGGCATTTCCCT
TTTGTTTCCGCCTGCATCCTTTGGCCAAGACACGGACACCTTCCCCTTCC
CACCACGCTGCCACAATGGAAAATACAATTTTCGCAATCTTTGCTTATCT
TTTCATCTCTCTGTGGCTGCCTCGTTTGCTGCACGATTCGTTGTTGCTGC
TGTTGGCCATCCAGAAAATCGGTAAAAAGCGCAAGCTTTCTAGACCATTC
GTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATA
ATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGA
TTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATC
CAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCG
AGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTG
TAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGAT
GACCTGATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATATATTTG
CCCATGTGAAACGGGGGCGAAGAGTTGTCATATTGGCCACGTTTAATCAA
ACTGGTGAACTCACCCAGGATGCTGAAACGAAAACATATTCTCAATAACC
CTTTAGATAGGCAGTTCACCGTAACACGCCAATCTGCATTATTGTGTAAA
CTGCGAATCGTCTTGTATCACTCGGACGATGAACGGTCAGTTGCT
UFO02576.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:32:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33062-RB | 933 | CG33062-RB | 245..616 | 9..380 | 1845 | 99.7 | Plus |
| CG33062-RA | 954 | CG33062-RA | 266..637 | 9..380 | 1845 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:32:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19442106..19442394 | 380..92 | 1445 | 100 | Minus |
| 3L | 28110227 | 3L | 19446035..19446118 | 92..9 | 405 | 98.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:32:37 has no hits.
UFO02576.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:46 Download gff for
UFO02576.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33062-RA | 258..641 | 1..385 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:12:41 Download gff for
UFO02576.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33062-RA | 258..641 | 1..385 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:12:41 Download gff for
UFO02576.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19442106..19442393 | 93..380 | 100 | <- | Minus |
| 3L | 19446035..19446124 | 1..92 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:46 Download gff for
UFO02576.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19435206..19435493 | 93..380 | 100 | <- | Minus |
| arm_3L | 19439135..19439224 | 1..92 | 94 | | Minus |
