UFO02583.5prime Sequence
925 bp (807 high quality bases) assembled on 2009-01-14
> UFO02583.5prime
CAGTCGACATGTGGAAATACGGTCAAAACCAGGGTAATCAGGGACCATCG
AGCGGCGGCGGAGGAGGCGGGGGCCCCAACATGATGCCGATGGGTGGATT
TGGCATGCAGCACGGCAATATGCAGCAAATGCACATGTCGCCTCAACATC
AACAGCAGCAACAACAAATGGGCATGATGGGCGGCCCGGGTAGCATGCAG
ATGAATCCCCAAGGACCTGGAGGTCCTGGCGGCCTGATGCCCGGCATGTC
TCCGCAGCACCAGATGCAGCAACAGCAGCAGCAGCAGATGATGCAGCAGC
AAATGATGGTGCCCCAACAAGGAGTGGGCGTCGGAGTGGGAATGGGCGGT
GGTGTGGGAATGGGCGGAGGGGGAGTGGTTCCACAGCAGCAGCAACAGCA
GCCCCAACAAAACATGCCCCAGCAGAACATTCCCCAACAGCAACAGCAAC
TCAATCCGGTCGCAGGAATTCCACCCGGTGGAGCCGGGGGCAGCAACAAT
ATGCTGGCTATCTCGCAGCAAAATCCTCACAAGGAGATTAACATTGTGCA
GCTGTCCCGTCTCGGTCAGGAAACGGTGCACGATATCGCCTCGCGCTTCC
AGGAGGTCTTCGCCTCCCTCAAGGGCATCCAGCCCACCTCGCACAGGGAA
AACAGCTCCGAGAAGAAGGTGCAGGAGTACTTCCGCACCATCCGGCTGCT
CTTCAAGAGGGTGCGCATCATCTACGAGGAAGTGCAACGACGCCGGAATG
GATTACATGAGCGCCGAGAAGTCTGATTCCCTACCGCGATGAGCCGGAAC
CGAAAATCGAGCCCTCGCTGTGCGATGAGTACCGGAAAGTCCTGCAGGAA
CATGACTCATAGAGACCGTCAAGCTGAAGACGCAGCTACCCGAGATCCTC
GATCGACCCGCCATCTTCATCTGGG
UFO02583.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:25:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
MED30-RA | 1103 | CG17183-RA | 80..1001 | 9..925 | 4280 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:25:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 653089..654010 | 925..9 | 4130 | 97.7 | Minus |
Blast to na_te.dros performed 2014-11-28 23:25:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..7112 | 122..497 | 159 | 53.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2345..2674 | 112..457 | 144 | 53.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2369..2682 | 107..432 | 132 | 54.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2601..2958 | 108..450 | 132 | 53.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2742..2947 | 102..306 | 125 | 55.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6734..6793 | 108..167 | 119 | 70.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2795..2852 | 140..200 | 117 | 70.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6710..6882 | 129..301 | 117 | 55.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6802..6846 | 122..166 | 108 | 71.1 | Plus |
UFO02583.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:15:11 Download gff for
UFO02583.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MED30-RA | 189..1090 | 9..905 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:00:25 Download gff for
UFO02583.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MED30-RA | 80..981 | 9..905 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:00:49 Download gff for
UFO02583.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MED30-RA | 80..981 | 9..905 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:00:49 Download gff for
UFO02583.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 653109..654010 | 9..905 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:25 Download gff for
UFO02583.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 653109..654010 | 9..905 | 98 | | Minus |