UFO02590.5prime Sequence
998 bp (884 high quality bases) assembled on 2009-01-14
> UFO02590.5prime
CAGTCGACATGGGCAGCAAGGGCAAGGCTGGTCTGGACTTCTCCGGCAAA
GTGGTGCTTATCACGGGCGCAGCCTCCGGGATCGGGGCCGCCGCGGCGGA
GATGTTCTCGAAGCTGGGTGCCTGCCTGGCCCTGGTGGATCGGGAGGAGG
AGGGCCTCATATGTGTGATGAAACGCTGCATGAAGATGGGCCACGAGCCG
TACGGCATAGCCGGAGATCTGCTCAAGCCTCCGGAGATCGAATGCATTGC
GCGGAAGACCACGGAGCGCTACGAGGGCAAGCTGGATGTGCTGGTAAATG
GGGCTGGCATCATGCCCACGGGAACGCTGCAGAGCACGGAACTGGCCTGC
TTCACCCACGTGATGGAGGCCAATGTGCGTTCTGGGTTTTATCTGACCAA
GTTGCTGCTGCCCCAGTTGCTGCAGTGTAAGGGCAGCATTGTCAACGTGT
CCAGCGTCTGCGGACTTCGCGCTTTTCCCAATCTGGTGGCCTACAACATG
TCCAAGGCGGCGGTGGACCAGTTTACCCGCTCCCTTGCCCTGGATCTGGG
TCCCCAGGGTGTTCGGGTGAATGCGGTCAATCCGGGTGTGATTCGCACCA
ATCTGCAAAAGGCGGGGGGCATGGACGAGCAGAGCTACGCCGAATTTCTG
GAGCACTCGAAGAAGACCCACGCCCTGGGCCGGATTGGGGAGCCAAAGGA
GGTGGCGGCCGCCATTTGCTTCCTGGCCAGCGAGCTGGCCAGCTTCGTGA
CCGGCGTGACCCTTCCTGGGGACGGTGGCAAGCAGGTCATGTGTCCGCGC
GCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAGTGGTCAT
AATCATATCATATCATATCATATCACAACTAGCTAAGAGATCCTGTCATG
ACTAGTGCTGATTCTTCCCAATAAAAAACGCCGGCGCACGAGCGTTCTGA
ACAATCGATGGAGTTCTGGAGTCATTACTGATCTTATCACGGATTCAG
UFO02590.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:46:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31546-RA | 999 | CG31546-RA | 63..854 | 9..800 | 3945 | 99.9 | Plus |
CG31549-RB | 991 | CG31549-RB | 465..782 | 429..746 | 390 | 75.6 | Plus |
CG31549-RA | 1130 | CG31549-RA | 604..921 | 429..746 | 390 | 75.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:46:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 5634771..5635562 | 800..9 | 3945 | 99.9 | Minus |
3R | 32079331 | 3R | 5632795..5633112 | 429..746 | 390 | 74.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:46:31 has no hits.
UFO02590.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:14:55 Download gff for
UFO02590.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31546-RA | 56..854 | 1..800 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:39:23 Download gff for
UFO02590.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31546-RA | 56..854 | 1..800 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:40:29 Download gff for
UFO02590.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31546-RA | 56..854 | 1..800 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:40:29 Download gff for
UFO02590.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 5634771..5635567 | 1..800 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:39:23 Download gff for
UFO02590.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 1460493..1461289 | 1..800 | 99 | | Minus |