UFO02602.5prime Sequence
921 bp (804 high quality bases) assembled on 2009-01-14
> UFO02602.5prime
CAGTCGACATGACGCCCCATATGTGCTCAGTGGTGAGGTGTTTGCTTGCG
GCCCTAATCCTTGGCCAAGTGCAAGCCGAGCTGGATTTTAACAACGATCT
CGAAAACAGTCAAAAGTTCAAGAGCATACCAACCACAGTGAAAACCTATG
AGAACGATACAGTGCAGCTTCCGTGCACCTTAAACACTCCCTTCCGCTAC
GTCCGTTGGCATCGGGACGATGTGGCTCTGGTGGACTCCAGACACCCGGA
GCTCCCGCCGCCGGATCGCATAATGCTCTGGCCGAATGGCAGCCTGCAGG
TGGCCAACGTGCAGTCCAGTGACACCGGGGACTACTACTGCGAAATGAAC
TCGGATTCGGGTCATGTGGTCCAGCAGCACGCCATCGAAGTGCAATTGGC
TCCACAGGTGTTGATTGAACCATCGGATCTCACGGAGCAGCGGATAGGTG
CAATCTTCGAGGTGGTGTGCGAGGCCCAGGGAGTGCCCCAACCGGTCATC
ACCTGGCGGTTGAACGGCAATGTCATCCAGCCACAGAGCAACACGGGGAA
TCGGCAAAGCCTCATCCTGGAGATCAAATCGAGGAACCAGGCGGGCCTCA
TAGAATGCGTGGCCAGCAATGGAGTGGGTGAGCCAGCGGTGGCCAATGTC
TATCTCCATGTGCTATTTTCGCCCGAGGTGAGCATACCCCAACCCGTGTG
TACACCAAACTGGGCTCCCGTGCCCATCTTGAGTGCATTGTGGAGCGGCA
CCGGCGGCCACGGTTAAGTGCTCCATCACGGACTGCCGGTGGCACTGGGA
GCCCACTCCCACCACTCACGAGTCGAGTTGCAGACGAACGGTCGTGGATC
ACTACGTGAACGCTTGCGTCACATGCTGGTGGTTGAAGGCGTGGAGACGG
GAATGGCATACAGTGCCCGCC
UFO02602.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:14:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wrapper-RA | 1977 | CG10382-RA | 166..1056 | 9..893 | 4185 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:14:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22380852..22381331 | 187..666 | 2400 | 100 | Plus |
| 2R | 25286936 | 2R | 22379802..22379979 | 9..186 | 890 | 100 | Plus |
| 2R | 25286936 | 2R | 22381400..22381622 | 667..883 | 690 | 95.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:14:39 has no hits.
UFO02602.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:14:13 Download gff for
UFO02602.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wrapper-RA | 291..1183 | 9..896 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:08:20 Download gff for
UFO02602.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wrapper-RA | 166..1058 | 9..896 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:42:42 Download gff for
UFO02602.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wrapper-RA | 166..1058 | 9..896 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:42:42 Download gff for
UFO02602.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22379802..22379979 | 9..186 | 100 | -> | Plus |
| 2R | 22380852..22381331 | 187..666 | 100 | -> | Plus |
| 2R | 22381400..22381649 | 667..906 | 92 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:08:20 Download gff for
UFO02602.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18267307..18267484 | 9..186 | 100 | -> | Plus |
| arm_2R | 18268357..18268836 | 187..666 | 100 | -> | Plus |
| arm_2R | 18268905..18269154 | 667..906 | 92 | -> | Plus |
