Clone UFO02605 Report

Search the DGRC for UFO02605

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:26
Well:5
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG6465-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO02605.5prime Sequence

1083 bp (950 high quality bases) assembled on 2009-01-14

> UFO02605.5prime
CAGTCGACATGGCCACCAGCAAGTGGGAATCCGATGAGGAGATACAGTAC
TTTCGCGAGTATCTGCGCATCCCAAGTGTCCATCCCGATCCGGACTATGC
ACCATGCGTCGAATTTCTCAGACGACAGGCAAATCTGATGGATCTGCCAA
TGAAGGTGTATTACCCGGCAAATGAACAGAATCCCGTAGTGGTTTTGACA
TGGAAGGGACTCAATCCCGAGTTGCCCAGCATTCTGCTGAACTCCCACAT
GGACGTGGTTCCCGTATTTCCAGAAAACTGGACTCACCCGCCATTTGGAG
CCGACATCGATGAGGAGGGTCGCATTTTTGCCAGGGGAACACAAGATATG
AAGTCCGTGGGAATGCAGCATCTAGCCGCAGTTAGAGCGCTCAAGAGAAG
TGGAGCGAAATTCAAACGAACTATCCACATTTCCTTTGTGGCGGATGAGG
AAATGGGCGGTCGTTATGGCATGAGACCTTTTGTGCCAACTGAAGATTTC
CGTGCTCTTAATGTGGGATTTGCAATGGACGAGGGATTGGCTTCACCCGA
TGAGCAGCTGCCTCTTTTCTATGCAGAACGAGCAGTTTGGCGTGTATATT
TCAACATCAGTGGGACTGCTGGTCATGGATCGCTTTTGCTGCCCAATACT
GCTGGTGAAAAACTGAACTATATAGTCGGAAAGATGATGGAGTTTCGTAG
GAGTCAGGTTCAAAGATTGCAGAATAATCCAGAGTTGGTCATTGGCGATG
TAACGACCATTAATTTGACCAAACTCGGTGGCGGAGTTCAGAGCAATGTG
GTGCCTCCCTTGCTAATGGTCTGCTTCGATTGTCGTTTGGCTCTAGATGT
GACTTTGAAGAGTTTGAGGCTTACCTCCACAAATGGTGTGCCGACGTGGG
GTGGTGCATCGAGATCACTTACGAACAGAAGCACCTAAGTTCCCGCCCAA
CGCATCGATGGAGTAATCCCTTCTGGCTTGCTTTCAGAAGCTACCGATGG
AATGCACTATCCTTCAACGCATATTTAACGAGACTGAATGCAGAATCCTC
GCCGTGGCATCCCAGCTTGGGCCTTCACCATGA

UFO02605.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:24:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG6465-RA 1377 CG6465-RA 92..1177 9..1076 4745 96.7 Plus
CG17110-RC 2911 CG17110-RC 632..727 599..694 240 83.3 Plus
CG6726-RC 2911 CG6726-RC 632..727 599..694 240 83.3 Plus
CG17110-RC 2911 CG17110-RC 1808..1932 238..362 190 76.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:24:56
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10676650..10676995 444..99 1730 100 Minus
3R 32079331 3R 10676097..10676377 871..592 1340 99.3 Minus
3R 32079331 3R 10676440..10676589 593..444 750 100 Minus
3R 32079331 3R 10677070..10677160 99..9 455 100 Minus
3R 32079331 3R 10675922..10676036 986..875 320 91.3 Minus
3R 32079331 3R 23092608..23092703 599..694 240 83.3 Plus
3R 32079331 3R 23093968..23094092 238..362 190 76.8 Plus
3R 32079331 3R 23098473..23098537 607..671 190 86.2 Plus
Blast to na_te.dros performed on 2014-11-28 20:24:57 has no hits.

UFO02605.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:14:07 Download gff for UFO02605.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6465-RA 4..992 1..986 98 == Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:45:57 Download gff for UFO02605.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6465-RA 85..1073 1..986 98 == Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:30 Download gff for UFO02605.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6465-RA 85..1073 1..986 98 == Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:30 Download gff for UFO02605.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 10675907..10676036 875..999 92 <- Minus
3R 10676094..10676377 592..874 98 <- Minus
3R 10676442..10676588 445..591 100 <- Minus
3R 10676650..10676994 100..444 100 <- Minus
3R 10677070..10677166 1..99 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:45:57 Download gff for UFO02605.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6501629..6501758 875..999 92 <- Minus
arm_3R 6501816..6502099 592..874 98 <- Minus
arm_3R 6502164..6502310 445..591 100 <- Minus
arm_3R 6502372..6502716 100..444 100 <- Minus
arm_3R 6502792..6502888 1..99 96   Minus