UFO02618.5prime Sequence
1066 bp (942 high quality bases) assembled on 2009-01-14
> UFO02618.5prime
CAGTCGACATGATATCTTTCCTGCCGCTCTGCGCCCATCCCAATCCCAAA
AAGGTCCTGATCGTGGGCGGTGGCGATGGCGGCGTTGCTCGCGAGGTGGT
AAAGCATCCACTGGTCGAGGAAGTGCATCAGGTGGAAATCGACGACCGTG
TCGTCGAGCTGTCCAAGCAATATCTCCCAGCGATGGCCTGTGGTTTCGCC
AACGAGAAGTTGAAGCTTACCATTGGCGATGGATTCGACTATATGAAGAA
ACACAAGAACGAATTTGATGTCATCATCACCGACAGCTCGGATCCCATTG
GTCCGGCAGTGAGCCTGTTTCAGGAAAGCTACTACGAGCTAATGAAACAC
GCGCTGAAGGATGACGGAATCGTGTGCTCCCAGGGCGGTAGCTTCTGGCT
GGACCTGGACTACATCAAGAAGACCATGTCCGGCTGCAAGGAGCACTTTG
CTAAGGTGGCCTATGCCGTCACCTCCGTTCCGTCCTATCCCTGCGGCCAC
ATTGGCTTCGTCATGGGCTCCCTGAACAAAAACCAGGACTTCGCTACTCC
CAAGCTTGGAAAGTCCGAAATCGATTCTATAGACCTAAGGTACTACTCCT
CCGAGGTTCACTCCGCCGCCTTTGCCTTGCCTCGATGGGTGCAGAAGCAC
TTTTACGAAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGT
AAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTA
GGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCC
CGCCGGCAACGAGCGTTCTGAACAATCCAGATGGAGTTCTGAGTCATTAC
TGGATTTTATCAACAGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCG
CCTGCCACTCATCGCAGTACTGTTGTATTCATTAGCATTCTGCGAAATGA
GCATCACAACGCATGATGACCTGATCGCCAGCGCATCAGCACTTGTCGCT
TGGCTATAAATATTTGCAATGGTGAAACGGGCGAAGAGTTGTCATGTGCC
AGGTTTAATCAACCTG
UFO02618.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:49:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| SpdS-RC | 995 | CG8327-RC | 261..911 | 9..659 | 3255 | 100 | Plus |
| SpdS-RB | 1189 | CG8327-RB | 455..1105 | 9..659 | 3255 | 100 | Plus |
| SpdS-RA | 1511 | CG8327-RA | 291..941 | 9..659 | 3255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:49:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9632453..9633103 | 9..659 | 3255 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:49:29 has no hits.
UFO02618.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:08:53 Download gff for
UFO02618.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SpdS-RB | 461..1127 | 1..667 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:41:13 Download gff for
UFO02618.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SpdS-RA | 285..951 | 1..667 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:01 Download gff for
UFO02618.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SpdS-RA | 285..951 | 1..667 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:42:01 Download gff for
UFO02618.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9632447..9633113 | 1..667 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:41:13 Download gff for
UFO02618.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5458169..5458835 | 1..667 | 98 | == | Plus |
