UFO02624.5prime Sequence
1105 bp (1000 high quality bases) assembled on 2009-01-14
> UFO02624.5prime
CAGTCGACATGGATAGCTCGGTGCCATCCGGAGCCGAAAGCGGTCTTATC
AAGGAGTACAAGGACTTTGCCAAATGCCTGGACGAACTGGAGTTCAAGAC
CGATGAGCTGCTAATCGATGCTAAAATGGTGGATCAGGAGTTGGCCAACT
GCCACAAGTTTCGCGAGGATCAGCTGCTGAAGCATCTGACGGAGAAGAAC
GACGACGACGAGCAGATGCAGTTGCTGCGGGAAAACATCGAGCTCAAGGC
GACCGGCGTTGAGTTCCAACACGGCATTGAGCTGATCATGGAGAAGTACC
GTGAGCACAGCGAAGGGGACATGTTAATCGATACCTACCAACTGAGGGAG
CACTACCTGGCCGGTTTGTCGAAGGTGGTCGAAGAGCAGGATGCCCGCAT
CGAGCGTATGGTTGATGTGATGAAGCTAACTGTCGACTTCGAGGACCGGA
GCAGTGCCGAGAACCAGCAGATCATTTGCCAGCTGACTGATGAAAATGAG
CAGTTGCGTCGTCAGTTGCAGATCAGTACCACCGATGAGCTGTTCCGCCA
GGGAGCACTGAGCTCCAGCGAAAGTAGCACTCAGATCGGACCAAACGATT
CTTTGGATTCGAGTGCCACCCGGGAGAATAGCATCTACAGCATAGATAGC
TTCCTCTCCTGCCTTTCGCCGAGCAGCGTGGAGGATGATTCGGAGTGCTC
ATCCAACAATTCGCTGCTGAGTGAGCTGGAAGTCACTTGCTTTATTGAGG
AGGCTCTGGCCGAGAAGCCCGAGGAGGCAAGCTTTCTAGACCATTCGTTT
GGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCA
TAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCT
CACCAATAAAAAACGCCCGGCGCACCGAGCGTTCTGAACATCCAGATGGA
GTCTGAGTCATTACTGGATTTTATCACAGAGTCAGCGAGCCTCGATATCA
AATACGCCCCCGCCTGCACTCATCGCAGTACTGTTGTATTTATAAGCATT
CTGCGAATGGAGCACACAACGCGCATGATGACTGAATCGCCAGCGCATCC
AGGAC
UFO02624.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| h-cup-RA | 1545 | CG6130-RA | 83..850 | 9..776 | 3840 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15382102..15382869 | 776..9 | 3840 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:16:10 has no hits.
UFO02624.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:08:58 Download gff for
UFO02624.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6130-RA | 80..850 | 5..776 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:22:41 Download gff for
UFO02624.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| h-cup-RA | 80..850 | 5..776 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:55:30 Download gff for
UFO02624.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| h-cup-RA | 80..850 | 5..776 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:55:30 Download gff for
UFO02624.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15382102..15382872 | 5..776 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:22:41 Download gff for
UFO02624.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11207824..11208594 | 5..776 | 99 | | Minus |
