UFO02625.5prime Sequence
932 bp (796 high quality bases) assembled on 2009-01-14
> UFO02625.5prime
CAGTCGACATGGTGAAGACGTTTCAGGCCTATCTACCGTCCACGAATCGG
ACATACTCATGTGTTCACTGCCGCGCCCACCTCGCCTCCCACGACGAGCT
CATATCGAAGTCGTTTCAGGGCAGTCAGGGACCGGCCTATCTGTTCAACT
CGGTGGTGAACGTGGCCTGTGGCCAGACGGAGGAGCGTGTGCTCCTGACC
GGCCTCCATGCGGTGGCGGACATCTACTGCGAGTGCTGCAAGACGCCGCT
GGGCTGGAAATATGAGCACGCCTATGAGTCCAGCCAAAAGTACAAGGAGG
GCAAGTTCATCATTGAGCTGGCGCACATGATCAAGGAGAACGGCTGGGAC
GCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCA
TAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCT
GGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAA
CCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATC
TATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGC
CACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAA
GCCATCACAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTT
GTCGCCTTGCGTATATATTTGCCCATGGTGAAACGGGGCGAAGAGTTGTC
CATATTGCCACGTTTAATCAAACTGTGAACTCACCCAGGATGGCTGAAAC
GAAAACTCTCTCATAAACCCTTAGGAATAGGCAGGTTTCACGTACACACC
ACATCTGCAATATTTGTGTAGAACTGCGAATCGTCTTGCATCACTCAATC
GATGAAAGTTCAGTGCTCATGAACGTGTACAA
UFO02625.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:31:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15309-RE | 3058 | CG15309-RE | 775..1116 | 9..350 | 1710 | 100 | Plus |
| CG15309-RD | 2877 | CG15309-RD | 594..935 | 9..350 | 1710 | 100 | Plus |
| CG15309-RC | 2606 | CG15309-RC | 323..664 | 9..350 | 1710 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:31:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10207234..10207575 | 350..9 | 1710 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 20:31:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| BS | 5142 | BS BS 5142bp | 2465..2510 | 751..707 | 110 | 73.9 | Minus |
UFO02625.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:19:17 Download gff for
UFO02625.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15309-RB | 907..1260 | 1..355 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:48:15 Download gff for
UFO02625.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15309-RC | 316..669 | 1..355 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:09:17 Download gff for
UFO02625.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15309-RC | 316..669 | 1..355 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:09:17 Download gff for
UFO02625.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10207234..10207582 | 1..350 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:48:15 Download gff for
UFO02625.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10101267..10101615 | 1..350 | 99 | | Minus |
