UFO02627.5prime Sequence
895 bp (756 high quality bases) assembled on 2009-01-14
> UFO02627.5prime
CAGTCGACATGATGGGCACACGGGCTGCGGAGCCCCGAGGATCCAGGAGG
TCCTTGGCAGGTCAAAGCATTCAAGAGCTCTCTGTGTGCCAGGAACCCGA
CCCGCTAAACACCTTTTTGGAGAAACCACTTACCCTGTATCAGTGGATGC
GGTGGCGCAACTGCAAGACCCATAAGCCGCACCTAGAGGAAACATACCCC
AGCATTCTACCGCCTATATCCAAATGTGACGATGCCAAGACTCTGAAGTA
CGTTGAAAATGCCATGGAGGCCAACAAATGTAAAGAATACGTCAAGGAAG
ACGTGCTGACCGTGTGGAACTACAGTCCCCAAAAGGAATCCTTGGTGTGG
TATGGCGTTAAATCGCAGTACCCGTCTCCACAGGCCGTCCTCTATGACCG
CGCTTTGAAAAAGAGCCTAAAGGCGGCTAGTCTTGCTCCAAAACCGCCGA
AGAAGTCCAACATAAAGCCTAAATGGCAACTTCAGAAGAAGCCCCCCCAG
CCTGGCGCTTTTGTTTTAAATCGAAAATGTCTGAGGGCCAAGCTCGAAAG
GATGCCAAACATAAAACGCCAACTGAAGTCGAACAATGTCTTCTCCTGGC
TTCACTGTCCTCAGCCAGCGGATCCGAGCAATCCTTTTGACGATAGCGCC
GTCTATCCAGCGATCAGCATAGAACAGCGATGGACATGGCGAAGCCGGAA
AAGCCTCCCAAAACATGGCCTCAGACGTAGCATTGGTACTGCCCCCCGAA
ATGCGGCGAGGCAGAAAGCAAGTGCACCGATTACGAGTGGGCAAAGTACA
GATGGATCCCCGGCCGACACGAGCATTCCACCGCGAGATGCGACAAAGGC
CTTAACACGAGCCCGCAACTACAATGAACTGTCAATCGCTTGTAC
UFO02627.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:29:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43755-RB | 2333 | CG43755-RB | 137..1039 | 9..894 | 4000 | 97.3 | Plus |
| CG43755-RD | 1709 | CG43755-RD | 137..1039 | 9..894 | 4000 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:29:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 328817..329625 | 815..9 | 3820 | 99.3 | Minus |
Blast to na_te.dros performed 2014-11-28 23:29:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Idefix | 7411 | Idefix DME9736 7411bp Derived from AJ009736 (e1371475) (Rel. 58, Last updated, Version 1). | 3547..3622 | 220..295 | 119 | 61.8 | Plus |
UFO02627.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:19:15 Download gff for
UFO02627.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31920-RB | 132..1039 | 1..895 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:03:28 Download gff for
UFO02627.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43755-RD | 132..1039 | 1..895 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:03:26 Download gff for
UFO02627.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43755-RD | 132..1039 | 1..895 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:03:26 Download gff for
UFO02627.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 328721..329629 | 1..895 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:03:28 Download gff for
UFO02627.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 328721..329629 | 1..895 | 96 | | Minus |
