UFO02632.5prime Sequence
1005 bp (888 high quality bases) assembled on 2009-01-14
> UFO02632.5prime
CAGTCGACATGCAGGTTGATGGTTGTACCAGCAGCTCATCCGAGATCCCC
CATCCCGCGAAGCGTGAAACGTGGATCAGTGGGAAAATGCAGTCGTCATC
GCATTCCAAAGATGGTCATAATGCAGCGGGGGCTTCAAAACTGCTTCAGG
ATCACCAGGAGCCCGAGGACTACTTGGAGCACCTAATGAAGGAGGGCAGT
CAGGAGGGCGACAGCGGTGCTGATTTGGAGCTACCTTCGTGGTACGATGA
GCAGCTATTCAGGCGTGGTCAGAGCTACTTTAGCACGTATCGCTTTGTAA
TGAACGCCGGAATGCTGGCTGGTCTTATTGCCGTGCTGGCTATTCCATCC
ATTCTCCGGGTGCTGTCGTGCACACGCCAATCCTCGACAGCGTTCACCGC
CTACCGTCGCTATGTGCGTACTATATTCCACACGCAAGCCTGGTATAACC
ACAACATCGCGGACCGTGGCAGCAGGTTCTGGACCAGCATTGCGGCCGTG
AGGCGGGCCCACAGCCGCTCCAGTCATGCGTGCGCCCGCCAAGGAGCTGG
ACAGATCACCCAGAAGGATTTGGCGCTCACGCAGTTCGGTTTCATTGGCT
TCATAACGATGGGCGCACATCGCATAAAGCTGAAAGATCAGGACTTCCTG
GAGGCCACTACGCATATGTGGCGCGTTCTCGGCTATCTGCTGGGCATCAA
GGATGAGTACAACATCTGCGGTAGGAACTGGGCGGAGTCAAAGCTCCGCC
TGACATTGTGATGCGTAAGGTATACGAACCAGCTCTGGCAAACACTGGGG
AGATTTCAAACGAATGACCGAGCCCTGATTAATGGCTTGTGCACATAAAC
ACCATGCTGTCGTGATGCAACATATTCTTTGCAGCGATTGCTGCGTAGGA
TACGAGTACTACAGTTTCGATCATGAACGATGCCGCAGATCCAGCGAAGC
TGCACTACTACGACTGGATGTGGACGATTCTAGTCAGCTACGCTGTTCTC
TCGTC
UFO02632.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:54:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31344-RA | 1450 | CG31344-RA | 180..1209 | 5..1005 | 4425 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:54:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15223787..15224388 | 862..265 | 2810 | 99.3 | Minus |
| 3R | 32079331 | 3R | 15224742..15224934 | 265..73 | 965 | 100 | Minus |
| 3R | 32079331 | 3R | 15225082..15225150 | 73..5 | 345 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:54:48 has no hits.
UFO02632.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:19:12 Download gff for
UFO02632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31344-RA | 269..1302 | 1..1005 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:55:09 Download gff for
UFO02632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31344-RA | 176..1209 | 1..1005 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:32:41 Download gff for
UFO02632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31344-RA | 176..1209 | 1..1005 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:32:41 Download gff for
UFO02632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15223619..15224387 | 266..1005 | 95 | <- | Minus |
| 3R | 15224742..15224934 | 73..265 | 100 | <- | Minus |
| 3R | 15225083..15225151 | 1..72 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:55:09 Download gff for
UFO02632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11049341..11050109 | 266..1005 | 95 | <- | Minus |
| arm_3R | 11050464..11050656 | 73..265 | 100 | <- | Minus |
| arm_3R | 11050805..11050873 | 1..72 | 95 | | Minus |
