UFO02634.5prime Sequence
1068 bp (952 high quality bases) assembled on 2009-01-14
> UFO02634.5prime
CAGTCGACATGAAGTGCCAACTGCTTTTCGTGGCCACCGTGTGCCTGGCC
AGCGTTTGGGCGCTTCCCGTGCCCGACGAGGAGGTGGCCATCCAGCCGGA
CAGCGGTGCCAAGGCCGAGCTCCTGACCAAGACCGTGCTGCCCACCGCCG
TTGAGCCTGCTCCCTTGAAGCCCGAGGCCGAGAAGCCGGCAGAGACCAAG
ACCATCGAAGCCAAGGCCGCCGTTCCAGAGCAGCCCGACGTCAACGCCAA
CCCATCACCCAGCACTCCTGCCGCCGAGCCAGCCAAGGAGATCAACAGCG
TGGAGCTCAAGTCGAGCGCGCCGGACGTAGAGACCGCTCCGGCCATTCCT
GAGAAGAAGACCCTGCCCGAGGAGGCCAAGCCCGCCCAGGAGAACGCTCC
CGTTGAGGCCGAGAAGAAGCAGGAGAAGACCGCCCGCACGGAGGCGGAAC
CCACTGTCGAGGCTCAGCCCCAGGCCACCAAGGCCATTGAACAGGCCCCC
GAAGCCCCAGCCGCCAATGCCGAGGTGCAGAAGCAAGTTGTCGACGAGGT
CAAGCCCCAGGAGCCCAAGATCGATGCCAAGTCCGCCGAGGAGCCAGCGA
TTCCCGCCGTAGTGGCCGCCGAGAAAGAGACACCCGTGCCCGAGCAGCCC
GCCCGCCAGGAGAGGATCAACGAAATCGAACAGAAAGATGCCAAGAAAGA
CGCTGCTGTTGCCGAGGAGCCAGCCAAGGCCGCTGAAGCCACACCCACCG
CCGCTCCTGAAGCCGCCACCAAGTCGGACTCCAACATCCAGGTGATTGCT
CCCGAGAAGAAGTCCATCGAGTCGTCCCCTGCTGCTGCGGCTGCTTCTCC
TGCCGCCCAGGCTGCCCAGGCCAAGTCCGGTGAGGCCCCAAGCCAGTGAC
CAGCAGAAGAGCACCGAAACCGTTGCCGATCCGCTCCCGTCTAAGACATG
CCCCACTTGCTCCGGCGGTGCACCAGGTGACGAGCGTCAAGGACAGGAAA
AAGAACAGCAGCCGCTGAATCCGCTGCCAAGCCTGCCGACGAGAAGACGA
GAAACGGCGCCCCCCTGG
UFO02634.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:06:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| bnb-RD | 1853 | CG7088-RD | 80..1117 | 9..1031 | 4745 | 98 | Plus |
| bnb-RA | 2095 | CG7088-RA | 322..1359 | 9..1031 | 4745 | 98 | Plus |
| bnb-RC | 1947 | CG7088-RC | 174..1211 | 9..1031 | 4745 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:06:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18795358..18796293 | 941..9 | 4500 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:06:45 has no hits.
UFO02634.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:19:20 Download gff for
UFO02634.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bnb-RA | 318..1305 | 1..982 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:52 Download gff for
UFO02634.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bnb-RC | 167..1157 | 1..982 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:48:05 Download gff for
UFO02634.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bnb-RC | 167..1157 | 1..982 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:48:05 Download gff for
UFO02634.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18795277..18796297 | 1..1011 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:52 Download gff for
UFO02634.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18689310..18690330 | 1..1011 | 97 | | Minus |
