UFO02635.5prime Sequence
1079 bp (978 high quality bases) assembled on 2009-01-14
> UFO02635.5prime
CAGTCGACATGAGCTCCTGGAAGGACAGTCTCACGAGCATTCCGGGCACG
GTGGCGCAGTTGATTAACGAGAGCGCCAGCAACCTGTTACACGCCTCATC
CACGCTGGGATCAACAGTTGGCCTTGGAGGCTCTGGCTCCACTGGATCTG
GATCCGAGGCCGGAGGCTCCGAGGAAAGTGGTCCACAAGGTGCGGAGTAC
AGGGCGTTGCCCATTCCCGCGTCCTTGGTGCGCGAGCAATGGCGCCTAAT
CTTCACCAGCGATGCCAATATCCAGGATTTGCAGGCGGCCATCGCCCATT
GCAGAGATCTCGTCCTGCTGAGCGAGGAACTCAGCGAGGAGCGTCGCTGG
TTGGTGCGGCACCTGGTAGATTTGCGATACTCACTGCAGGAGCTGGAGGA
GGCCCAGGAGCAGCATTCCCTATCGTCGGACATGGTAGTTATGAATGCCA
TACGTGCTGTGGTGGGTCATCATTTTGTGCCCCATCACCCGCATCATGGC
AAACGGAATCGTCTGCAGGCAGCCGCCAAGAGGAACTACTGTGACCACTG
CACCACCATTATTTGGAGTGTGGTGCAGAACTCGTACGTGTGCAGCGATT
GCGGATTCCTGGTCCATCAGAAGTGCATCGATGGCGTGAAGAGGGTTTGT
GCCCATGTCCTGTTTTCAGAGCGGCAGCATCCCATTTCGGAGATATGTCC
AGAAATCGGACTCGCCTCCCAGGGATACAAGTGCGCCGAGTGCGGGACGA
TGCTAAATATAAAAAATACCTGGATTGAGCCGCGTCTATGCGACTATAGT
GGATTGTACTACTGCCCTCGCTGCAACTGGAACGACAGTAACTTTATACC
AGCCCGCATTATCCACAATTGGACTTTTCGCCACGCAGAGTGTCGCGCAC
GGCGCTCAGAGATTAGTTGTTCCTAAATAAACCGCTCATTCGCTTGAGAG
ACATCCAGCTGTTTGTGTTCGTAAAAAAATGGGGGGCGGTAAAGAACTTC
GCCAATCTGGTGCAATGGCCCACTATCTGCTGCCTGCAAAATGCCAGCGA
GTTGAAACTGGTGATCAGCACTGGGTGTC
UFO02635.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:14:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11534-RA | 1637 | CG11534-RA | 78..1166 | 9..1079 | 4890 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:14:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12132223..12132976 | 9..762 | 3755 | 99.9 | Plus |
| 3L | 28110227 | 3L | 12133029..12133345 | 763..1063 | 815 | 91.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:14:46 has no hits.
UFO02635.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:19:19 Download gff for
UFO02635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11534-RA | 52..1140 | 9..1079 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:00:46 Download gff for
UFO02635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11534-RA | 78..1166 | 9..1079 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:46:33 Download gff for
UFO02635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11534-RA | 78..1166 | 9..1079 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:46:33 Download gff for
UFO02635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12132223..12132976 | 9..762 | 99 | -> | Plus |
| 3L | 12133029..12133363 | 763..1079 | 92 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:00:46 Download gff for
UFO02635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12125323..12126076 | 9..762 | 99 | -> | Plus |
| arm_3L | 12126129..12126463 | 763..1079 | 92 | | Plus |
