Clone UFO02636 Report

Search the DGRC for UFO02636

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:26
Well:36
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG11594-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO02636.5prime Sequence

770 bp (657 high quality bases) assembled on 2009-01-14

> UFO02636.5prime
CAGTCGACATGGACCATCGTGCCGAGCAGGAAACCCAAGAGATCAATGCC
TTCAAACACTCGCTGCTGAAATATGTGGGTGGTCAGGTTTCGCTGGAAAT
GGAGGTTCCCAAATTGCTGTGGCTGAAGAGGAATCTGTCACAGACTTTTG
GAAATATTTGGAGGGTCTTTGACCTGCCCGACTTTCTGACCTGGCGAGCC
ACTGGAGTGGACACCCGATCACTTTGCTCGGTGGTGTGCAAGTGGAACTA
CGATGCAGCGAATGGCAGTTGGAACAAGGAGTTCCTGAAGCAGGCGGACT
TGGAGGAGTTGACACAGAATAACTTCGAGAAATTGGGCAGTGATGTCCAG
CCGCCTGGCCGAACGGTGGGCAAAGGACTCACGGCCAAGGCTGCTGGGGA
ACTGGGCTTATCCGCCGGCACTGTGGTGAGCACCTCCCTAATCGATGCCC
ATGCTGGCGCCTTGGGAATGTTTGGATGCCGCTCAAAGGAGTCCAAGGGT
GCCGACGATGTCCAGGGTAAAATGGCTCTGATTGCCGGTACATCCACCTG
CCACATGAGCATCACCCGGAAGGCATGCTTCGCACAGGTGTTTGGGGTCC
CTATCAGATGCCATTATTCCCGCTACTTCCTAAACGAGGTGGTCAGAAGC
ATCGCAGACATTCTCCTAGATCACGTCCTCAAGTCCATGATCCTACGCGA
CTGAAATCCCATTGGGGAAGAATAGTTTATCTACCAAGCATTTTTATTAA
GTGGCTGGCGGAACTGGCAG

UFO02636.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:22:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG11594-RE 2123 CG11594-RE 711..1479 9..770 3370 97 Plus
CG11594-RD 1879 CG11594-RD 467..1235 9..770 3370 97 Plus
CG11594-RC 1944 CG11594-RC 532..1300 9..770 3370 97 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:22:55
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4023886..4024565 685..9 3080 98.5 Minus
Blast to na_te.dros performed on 2014-11-28 19:22:56 has no hits.

UFO02636.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:19:18 Download gff for UFO02636.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11594-RC 530..1298 9..770 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:46 Download gff for UFO02636.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11594-RC 532..1300 9..770 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:14:32 Download gff for UFO02636.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11594-RC 532..1300 9..770 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:14:32 Download gff for UFO02636.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 4023797..4024565 9..770 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:46 Download gff for UFO02636.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4023797..4024565 9..770 97   Minus