UFO02636.5prime Sequence
770 bp (657 high quality bases) assembled on 2009-01-14
> UFO02636.5prime
CAGTCGACATGGACCATCGTGCCGAGCAGGAAACCCAAGAGATCAATGCC
TTCAAACACTCGCTGCTGAAATATGTGGGTGGTCAGGTTTCGCTGGAAAT
GGAGGTTCCCAAATTGCTGTGGCTGAAGAGGAATCTGTCACAGACTTTTG
GAAATATTTGGAGGGTCTTTGACCTGCCCGACTTTCTGACCTGGCGAGCC
ACTGGAGTGGACACCCGATCACTTTGCTCGGTGGTGTGCAAGTGGAACTA
CGATGCAGCGAATGGCAGTTGGAACAAGGAGTTCCTGAAGCAGGCGGACT
TGGAGGAGTTGACACAGAATAACTTCGAGAAATTGGGCAGTGATGTCCAG
CCGCCTGGCCGAACGGTGGGCAAAGGACTCACGGCCAAGGCTGCTGGGGA
ACTGGGCTTATCCGCCGGCACTGTGGTGAGCACCTCCCTAATCGATGCCC
ATGCTGGCGCCTTGGGAATGTTTGGATGCCGCTCAAAGGAGTCCAAGGGT
GCCGACGATGTCCAGGGTAAAATGGCTCTGATTGCCGGTACATCCACCTG
CCACATGAGCATCACCCGGAAGGCATGCTTCGCACAGGTGTTTGGGGTCC
CTATCAGATGCCATTATTCCCGCTACTTCCTAAACGAGGTGGTCAGAAGC
ATCGCAGACATTCTCCTAGATCACGTCCTCAAGTCCATGATCCTACGCGA
CTGAAATCCCATTGGGGAAGAATAGTTTATCTACCAAGCATTTTTATTAA
GTGGCTGGCGGAACTGGCAG
UFO02636.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:22:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11594-RE | 2123 | CG11594-RE | 711..1479 | 9..770 | 3370 | 97 | Plus |
CG11594-RD | 1879 | CG11594-RD | 467..1235 | 9..770 | 3370 | 97 | Plus |
CG11594-RC | 1944 | CG11594-RC | 532..1300 | 9..770 | 3370 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:22:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4023886..4024565 | 685..9 | 3080 | 98.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:22:56 has no hits.
UFO02636.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:19:18 Download gff for
UFO02636.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11594-RC | 530..1298 | 9..770 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:46 Download gff for
UFO02636.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11594-RC | 532..1300 | 9..770 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:14:32 Download gff for
UFO02636.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11594-RC | 532..1300 | 9..770 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:14:32 Download gff for
UFO02636.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4023797..4024565 | 9..770 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:46 Download gff for
UFO02636.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4023797..4024565 | 9..770 | 97 | | Minus |