UFO02647.5prime Sequence
720 bp (610 high quality bases) assembled on 2009-01-14
> UFO02647.5prime
CAGTCGACATGTGCTTTCTACGATTTTTGGCCCAGGCCAGGGGCACCTTG
GGACGGCATCTGGCGGAGGCCTCACCAGTTGCCTGGGCTGCTGCTCCCGA
CGTTTCCGGCCGGAAATTACATCTGGTAATGGGCAACGAATCGTGTGACT
TGGACTCCGCCGTTTCGGCCGTCACTTTGGCTTTTGTCTACGCGCAGCGT
CATCGGGAGCACGACTATGTACCTATACTGAACATTCCTCGCCGGGACTA
CCCGTTGAAAACCGAGGTGGGCCACTTGTTTGTGAAATGTGGGATTGCCG
AGCCCGTGTTGCTCTTCCGAGACGATATTCCCCGGGAAGTGGTCCAGGAT
GTGAACGTTATTCTCGTGGACCACCATGTAAGCCCGCTGGCGCCAAATGT
TACTGAAATTTTGGATCACAGGCCCTTGGAGGACAGCAGTCCATCCTTCA
AGCAGCTGCCAACACTCTGCCAACTGGACATAGATGCCTCGGTGGGTTCC
TGCGCCACTCTGGTGCCCAGCGGTATTTGGCAGAGACCAACCCCGATCCA
CTAGCGTGCCCAGCTGCTGCACCGCCACCATCGTGCTGAACACAATAATT
TTGCACCCGCGCAGCGCCTACGGCAAGACGAGCCATGTTACAGAAGTGGA
GGGCGAGCTACCGTAGACCGCTCAAGAAGTAGCTTTTGATGGCTATGGCT
GCAGCTGAAATTAGTAAGCT
UFO02647.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:06:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pn-RA | 1638 | CG3461-RA | 90..823 | 9..720 | 2995 | 95.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:06:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2181415..2181973 | 56..611 | 2535 | 98.9 | Plus |
| X | 23542271 | X | 2181300..2181347 | 9..56 | 240 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:06:38 has no hits.
UFO02647.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:19:07 Download gff for
UFO02647.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pn-RA | 207..826 | 9..623 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:49 Download gff for
UFO02647.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pn-RA | 90..709 | 9..623 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:48:01 Download gff for
UFO02647.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pn-RA | 90..709 | 9..623 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:48:01 Download gff for
UFO02647.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2181300..2181347 | 9..56 | 100 | -> | Plus |
| X | 2181416..2182014 | 57..643 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:49 Download gff for
UFO02647.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2075333..2075380 | 9..56 | 100 | -> | Plus |
| arm_X | 2075449..2076047 | 57..643 | 97 | -> | Plus |
