UFO02651.5prime Sequence
944 bp (802 high quality bases) assembled on 2009-01-14
> UFO02651.5prime
CAGTCGACATGGCCTTCCGCTCGGTGGTTACGATGGAGAAGCCGCTCCAG
CACATTTCGCTGACGGACTGGTATGCCCGTGTGAACCAGATGCGGAATGT
GGCGGATGCCCGGAGGTCGGACGCCTTCGCCATCCGCCACTCATCCCGAT
CCTTGAGGAACGAGACGCGGATCGAGGGCGACTGGGCCAACTACGAGACA
AATGAGGCTCTGACCGATCGCATCTCCGAGTTGAATCGCTGGCGGGATAT
CATTTCCAAGTCCTTCGAGAAGATCGAGCGCGAGATATTCATGCTGCAGG
AGGAGAAGAATGCCACGGAACGGGAGCTGGAGGCGTTGGCAGGTCCGATT
TCCGTGATAGCCGAGTGCCTGACCATAAGGGACGGTCGCCTCGGATCGGA
GATCACCTACGATGAGGCCGACACCGAGATCAAGAACGAACTGGTCGTGC
TGGAGAACAACCAGCGCCTGCTGGCCGATCGATGCCAGAAGGCGTGGGAG
AAGCTCAATCGTCTGGAGGAAGTGCGCTTCAAGATCGGCCTGGAGATCGA
GTTCAAGGTGGAGGCGGTGCAGCTGGACAACTCACAGCTGGCGCTCGATC
GCAACTCGGCCAATATCTCATACAAGCCGGATCCCACGAGAAATCCCAAG
AACTCCTGTTCCTACGAGTCCTGGCTGGAGAACGTGAAGAACATAAAGCT
GCTGGCGGAGATGAGCTGGCCGACACGTACGCCATTCAGGAGGCTTTGTT
CGTGTGCCGCGAAAAGCGCGCAACATGCTGCAGTCGCAGCAGGAGCGGGC
GGAGCACACCATCCGCAAACGATCTTCGAGACCGCAGCGGGCCAGAACGA
ACTGGGAGTGCAGCAGCTCAGATGAGAGGAGATGGAAAGCCATGGTGCGA
ATCCGCCCCCTCGAAATGCCTGGCTGACAGACGATGCCTGAACT
UFO02651.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:57:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3085-RB | 1749 | CG3085-RB | 268..1173 | 9..906 | 4190 | 98.3 | Plus |
| CG3085-RA | 1670 | CG3085-RA | 189..1094 | 9..906 | 4190 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:57:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23075530..23075962 | 220..652 | 2165 | 100 | Plus |
| 2R | 25286936 | 2R | 23075255..23075466 | 9..220 | 1060 | 100 | Plus |
| 2R | 25286936 | 2R | 23076020..23076240 | 653..870 | 785 | 95.5 | Plus |
Blast to na_te.dros performed 2014-11-28 19:57:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dbuz\Osvaldo | 9045 | Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). | 1536..1634 | 777..876 | 119 | 61.8 | Plus |
UFO02651.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:18:40 Download gff for
UFO02651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3085-RA | 183..1092 | 1..906 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:23:12 Download gff for
UFO02651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3085-RA | 185..1094 | 1..906 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:46:54 Download gff for
UFO02651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3085-RA | 185..1094 | 1..906 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:46:54 Download gff for
UFO02651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23076020..23076281 | 653..906 | 94 | | Plus |
| 2R | 23075251..23075466 | 1..220 | 98 | -> | Plus |
| 2R | 23075531..23075962 | 221..652 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:23:12 Download gff for
UFO02651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18962774..18962989 | 1..220 | 98 | -> | Plus |
| arm_2R | 18963054..18963485 | 221..652 | 100 | -> | Plus |
| arm_2R | 18963543..18963804 | 653..906 | 94 | | Plus |
