UFO02655.5prime Sequence
1060 bp (973 high quality bases) assembled on 2009-01-14
> UFO02655.5prime
CAGTCGACATGTCTAGTGCCAGGCTACTCGAGTCGCAGACATCCGACGAG
GATAACGAGGACATCGAGCGGCGGCCTCACCAGAGCCATTCACGCAGCTG
CAGCAACAACACCACCCCCACCCATCCACCACATCCCATGGTCAGGAAGG
GGGGTGTGGCCAGGAGGATCTGCCTGATAGGTGGGGCACTGTTCCTGCTC
CTCGTCGCCCTCTGCTACCTCACCCTCAGCGGGGACACTCGCCTCGGTGG
CTCCGAGGATTCGGAGGAGGGATCTCACCATGGATTAGATAGTATGAATT
TCCGGCCATTGAACGAAACCGTTCACATATGCAGCGAGAGTTACGAGGAT
CGACGGCAGTTCATGCAGGATAAGCCCCAATCTGATTACGTCCAGTTGCC
CGTGATATACTTTGTTACTCCAACGTATCCGCGGCGCGAGCAAATCCCAG
AACTAACCCGTCTGGCGCACACGCTGCTCCATATTCCACGATTGCACTGG
CTGGTGGCCGATGATCAAGAGAAATGCAATGACTATATGGACACGCTGCT
CTATCGATTTGGTATGCCCTTTACCCACATGGTCAGCCCGATGCCCAGCA
AATTCCGGAATGAAAAGCCAGCGCCGCGAGGTGTGGCAAATCGGAGGGCA
GCCTTGCAGTGGATACGGCAGCATAATCTCACCAACGGAATACTTTACTT
CGGAGACGACGACAACACCTATGATCTGCGTTTGTTCTCTGAATCCGGAA
AACGCAACGGGTTTCCATGTTTCCTGTAGGTCTTATTGCTGATTATGGGG
TCAGCGGGCCAGTTGTGCGCAAGGCAAGGTTGTAGCATTCCTGGACTCCT
GGGTTGCCGGTCGACGCTGGCCCGTTGACATGGCGGTTTTGCAGTGATTT
GAGTACATGCGCAGTATCCTATGTGAATATGCCGTACAGCCCGGCTACGA
GAAGATCTCTTTCTGCCAGCATTGGCTCATGATCTGATGACCGCCGGCAT
AACTGCACGGATTCTGTTTGCACACGCAGACAGTCAAGAGCCGATGTCGA
TAAAGCAAAC
UFO02655.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:51:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GlcAT-S-RB | 2406 | CG3881-RB | 495..1541 | 9..1032 | 4675 | 97.7 | Plus |
| GlcAT-S-RA | 1677 | CG3881-RA | 44..812 | 287..1032 | 3285 | 96.9 | Plus |
| GlcAT-S-RC | 2116 | CG3881-RC | 1006..1772 | 289..1032 | 3275 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:50:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9617330..9617609 | 9..288 | 1400 | 100 | Plus |
| 2L | 23513712 | 2L | 9621143..9621420 | 287..564 | 1390 | 100 | Plus |
| 2L | 23513712 | 2L | 9621478..9621740 | 561..822 | 1265 | 99.6 | Plus |
| 2L | 23513712 | 2L | 9621957..9622118 | 823..976 | 430 | 94.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:50:59 has no hits.
UFO02655.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:18:37 Download gff for
UFO02655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GlcAT-S-RB | 467..1439 | 1..966 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:42:11 Download gff for
UFO02655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GlcAT-S-RB | 489..1461 | 1..966 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:44 Download gff for
UFO02655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GlcAT-S-RB | 489..1461 | 1..966 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:42:44 Download gff for
UFO02655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9617324..9617609 | 1..288 | 98 | -> | Plus |
| 2L | 9621145..9621417 | 289..561 | 100 | -> | Plus |
| 2L | 9621479..9621741 | 562..822 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:42:11 Download gff for
UFO02655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9617324..9617609 | 1..288 | 98 | -> | Plus |
| arm_2L | 9621145..9621417 | 289..561 | 100 | -> | Plus |
| arm_2L | 9621479..9621741 | 562..822 | 99 | -> | Plus |
