UFO02659.5prime Sequence
735 bp (651 high quality bases) assembled on 2009-01-14
> UFO02659.5prime
CAGTCGACATGAATAACCGTGGAGTTGGATTCTCGGAGTTTTTCGTAAAA
ACCCCAACCAGTCGGTCCATTCAATTGCGTGCCAAAAAAGTGGCAAAGGA
ACTGGTGATGCAAAATAAGGATGTGCGGGACAAGATATTGAAAAACAAAG
TGCTTACCTATGCACAATTCCGAAAGATAATGAAATCAGCTGGCAATGTG
ACGGATCTGAATCCGATCACCTATAAAAGTATGATTGAAATACGACAATC
GCAGATCGATCACAGACGTCTCAAGAGTATTAAATCTGCTGGGGATTCGC
TTGGATTTCATGCTCGCCTTCTCAATCGCAGCCAGTTAGCCGGCGAATTT
AACCAAAAGCAGGAGATTTTCCGAAAAAATATGGAACTCCTTGGACGGAT
TAACAAGACCAATCGACTAAAGGGGGGTGTGGATAGCTTCAATCGCCATT
TTCCCGCCCTTCAGTCGAATCGGAATAAAATCCGTGAGCTGGCAGATCGC
TTGAGCCAGGAGAACAGGCAGCTCGGTTGTCGCCTATCGCAGTGAAATCC
AAAGTGATTCACACAATCCTTGGGTGCCACCCGTCAAGCCACTCGAACAA
AAGGCCTCCGATGAGACGGTCAGTACTTTCTTGCCATATTTTGCCATCGC
CTCCGCTGGGCAACGTATGCCCAATCCTGCTGCGACCCATTCATATATTT
CGAATATGGCGGGTGCAAGAAAAATACAAGTTCAT
UFO02659.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:26:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32236-RA | 1463 | CG32236-RA | 150..877 | 9..735 | 3300 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:26:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4666543..4667240 | 703..9 | 3090 | 98.4 | Minus |
Blast to na_te.dros performed 2014-11-28 23:26:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| rooA | 7621 | rooA ROOA_LTR 7621bp | 3293..3329 | 481..517 | 113 | 78.4 | Plus |
UFO02659.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:18:43 Download gff for
UFO02659.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32236-RA | 146..867 | 1..726 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:43 Download gff for
UFO02659.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32236-RA | 146..867 | 1..726 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:01:55 Download gff for
UFO02659.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32236-RA | 146..867 | 1..726 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:01:55 Download gff for
UFO02659.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4666513..4667244 | 1..735 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:43 Download gff for
UFO02659.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4666513..4667244 | 1..735 | 97 | | Minus |
