UFO02660.5prime Sequence
1095 bp (970 high quality bases) assembled on 2009-01-14
> UFO02660.5prime
CAGTCGACATGGAAGCTGATGGACTGACCAACGAACAGACGGAGAAGGTC
CTCCAGTTCCAGGATCTCACCGGCATCGAGGATATGAACGTCTGCCGCGA
CGTCCTAATCAGACACCAATGGGATCTCGAGGTGGCCTTCCAGGAGCAGC
TAAATATCCGCGAGGGGCGTCCGACCATGTTCGCCGCCTCTACAGATGTC
CGAGCGCCCGCTGTCCTTAACGATCGCTTCCTGCAGCAGGTGTTTTCCGC
CAACATGCCTGGCGGAAGGACGGTTAGCCGGGTGCCCAGTGGCCCCGTTC
CCCGCAGCTTCACCGGCATCATTGGATATGTGATTAACTTCGTGTTTCAG
TACTTCTACTCCACGCTGACGAGCATCGTCAGTGCGTTTGTGAACCTGGG
CGGAGGAAACGAAGCCCGCTTGGTGACAGATCCACTGGGGGATGTGATGA
AGTTTATTAGGGAATACTACGAAAGGTATCCCGAGCACCCGGTCTTCTAT
CAGGGCACATATGCCCAGGCCCTTAACGATGCTAAGCAGGAGCTGCGTTT
TCTAATCGTTTACCTGCACAAGGATCCCGCCAAGAACCCAGATGTGGAAT
CCTTCTGCCGCAACACACTGTCGGCGAGATCGGTCATTGACTACATTAAC
ACACACACCCTGTTATGGGGATGCGACGTAGCCACGCCGGAGGGCTACCG
GGTGATGCAGTCGATAACGGTGCGCAGCTACCCAACGATGGTGATGATCA
GCCTTCGAGCAAATCGCATGATGATCGTCGGACGTTTCGAGGGGGATTGC
ACGCCCGAAGAGCTGCTCCGTCGCCTCCAGTCGGTGACGAACGCCAACGA
GTGTGGCTGAGTCAAGCGCGTGCAGATCGCTTAGAGCGTATTTTACACAG
ACTTTAAGAGACAGCAGACGAGGCATACGAGCAGAGTTTGCTTGCGACGA
GAGAGGACGTCAGCGCAAGGAGCGGGATGCGTCGCAGGCGGAGGAGGCTT
GTGACAGCTCGACGCGATGTCAGCTCCAAGGAGAGAATTGCCGCAAGATC
GAGCTGCCAATTGGTGCATCAACCGGCACGGATGCTGTCGGCATG
UFO02660.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:54:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Faf-RB | 2279 | CG10372-RB | 362..1474 | 9..1092 | 4785 | 96.9 | Plus |
| Faf-RA | 1978 | CG10372-RA | 451..1563 | 9..1092 | 4785 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:54:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18707043..18707863 | 946..130 | 3890 | 99.4 | Minus |
| 2L | 23513712 | 2L | 18708114..18708238 | 133..9 | 625 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:54:06 has no hits.
UFO02660.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:18:42 Download gff for
UFO02660.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Faf-RA | 443..1564 | 1..1095 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:54:44 Download gff for
UFO02660.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Faf-RA | 443..1564 | 1..1095 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:32:23 Download gff for
UFO02660.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Faf-RA | 443..1564 | 1..1095 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:32:23 Download gff for
UFO02660.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18706871..18707861 | 132..1095 | 96 | <- | Minus |
| 2L | 18708116..18708246 | 1..131 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:54:44 Download gff for
UFO02660.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18708116..18708246 | 1..131 | 96 | | Minus |
| arm_2L | 18706871..18707861 | 132..1095 | 96 | <- | Minus |
