UFO02668.5prime Sequence
1115 bp (996 high quality bases) assembled on 2009-01-14
> UFO02668.5prime
CAGTCGACATGTTTCCTGATGACTTCGACGTAGAACCCTTCAATCCATTC
AATGTGGGACCACCCAATAGTGGAGCCCGATCTGAATTCAAAATACCTAC
ATGCGTTACGTATCCGCCACCGGTATTCGTACCCAAGTCCGAATATGTAC
AACCATCAGAGGAGTTGGTTTCCCGGAAGAGCAACCAAAGTATAGGCAAG
TCGACTATCGGCGAGGTGGACATTTCCAAGGCCATCAATGAAGAGATGGC
CGTGGCCAAGAAGCAGGCCGAAGTTCTCAATGAAAAAGATCGCATTGATG
CGGGTGGTGTTTCAACAACGAAGCTGTCCAAGGTATCTCAATCAAAGGAA
GCGGTTTCAAAGGACTCTTTGCGCACCCTAATGCCAATAAGGTCAAACCG
TCAGGTCAGTGGTGATGGTAGAGCAAATTCCAAATTATCCATATCACAAT
TCAGTGCGGCATCCAAGACGAGCTGCACAAATAAGCAAAGTGAGGGTGAC
GTGGCCTCAAAGTCTTCGAACATAACATTGAAACGATCTGCAATAGGCAA
CAGTATTTCCTCAAATACCACCCTCACTCCGAAGTCAATTTTGAAGTCGA
AACATTTCTCAGAAGCAGCCAAAGCTTCCTCTACCACAATGAAATCAAAA
GTTTCAAATAAGCCATCAGAAACTGGAACGCAGCGCTCCTTCAAATTAAA
TCCTGCTGACTCAGACTCGAAACAATCTCTAAAATCTGCAAAACCAAAGC
ATTCCGATTTTAAAATGCAAGATAAGAAGCTGACCAGTTCTCAAGAACAA
GCCCCGTCTGTTGTTGCCACAAGTAATGCAAGGCAAGACTCTTGGAATGA
TCGTGTCCCTTCAAAGACCAACAAGTCAATGTACTACCTGAATCCAAGGA
TGGGCCCCAGCTTTTATTCATTCGGAAGCAGCTTTATCCTACAGACAGTC
CTTGACCAGCAGCTGCGAAATGGCGGATCGCCTAAACGCGGAAATGAACC
TTAGCGTTACAACCTCCGTGCACGATCCCCTCGATCAAAGTACCTTCAAA
ACTTACGATGGGATCGTATGAATTTGTTCAGCGAATGCTGTACTTCGCAG
CCTTTCTGACACTTT
UFO02668.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:52:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4983-RB | 1666 | CG4983-RB | 155..1254 | 7..1095 | 4960 | 97.6 | Plus |
| CG4983-RA | 1330 | CG4983-RA | 146..1245 | 7..1095 | 4960 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:52:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11652653..11653637 | 7..989 | 4620 | 99.3 | Plus |
Blast to na_te.dros performed 2014-11-28 20:52:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3S18 | 6126 | 3S18 DM23420 6126bp Derived from U23420 (g733531) (Rel. 48, Last updated, Version 3). | 1912..1999 | 1009..1099 | 114 | 63 | Plus |
UFO02668.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:18:27 Download gff for
UFO02668.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4983-RA | 139..1245 | 1..1095 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:44:04 Download gff for
UFO02668.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4983-RA | 139..1245 | 1..1095 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:32:43 Download gff for
UFO02668.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4983-RA | 139..1245 | 1..1095 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:32:43 Download gff for
UFO02668.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11652646..11653752 | 1..1095 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:44:04 Download gff for
UFO02668.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11652646..11653752 | 1..1095 | 97 | | Plus |
