UFO02669.5prime Sequence
871 bp (771 high quality bases) assembled on 2009-01-14
> UFO02669.5prime
CAGTCGACATGCTCCTCTGGTTGCCCATTGCGGTGGCACGCAGGATGTTC
ATCATCCTCGTCCTAATGGTAATTGGAGGCCTCTTCTACATCTACACTTC
GGAAAATAAATACCACTCATGCTTTATGGAGGGCCAAGTACTGGCAACTC
AGCAGGCGCTAACTGCAGATGGCGAAACAAATCTATTGGGCGACGTCCTC
CAGGCGGATCCCAAACCCTCGCCCGGAAACAGTATCTTCTTTCACGAGAC
CAGCTGCCGCCTATCCGAGAACAGACAGCTGGAGACGCTGAAGGTCACTG
CCCGCCAGGCATGCGCAATCGAGTCGGCAGCGATGCATAATCCGAATTTC
CAAGTGTTCGTCCTGTTCGCTGGCCCCACCTATCGAATCTCCAACAACAA
AAGCCATCCCCAACCATTGTTGGAGGCCATTCTCAGTTACAGCAATGTCC
ATCTACGTCGACTGAATCTCGAGAGTTACGCATCTGGCACGCCCATGGAG
GAGTGGCTCAAAGATGGTCGTTTGTCGCGGTCAAAATATTTGTTCTCGCA
CATATCAGACTTTCTCCGCTACCTTACCCTCTATCGGTATGGCGGTCTTT
ATCTGGACATGGATGTGGTGGTGCTTCGCACATGGAGAAGTGCCGCCCAA
TTACACAGTGCTGAGTCCAACACCCATTTGGCAGCTGGCGTAATGACCTG
CAGCCACTGGCTTTGGCCACGAGATCGCCGCGTCTGTTTGCCCGACTTCA
GCACAACTTTACGCGGGGACTGAGCACCATGCCCAAGGGTGATACCCGTG
TGGCTCAAAGATTTGGCACAAGACTGCTCTGATGCGAGAGACCCAAGCGC
TGCATGCTCAAGGATCGACGG
UFO02669.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:47:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| alpha4GT1-RA | 1714 | CG17223-RA | 127..997 | 8..856 | 3765 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:47:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3022423..3022950 | 535..8 | 2640 | 100 | Minus |
| 2L | 23513712 | 2L | 3022136..3022368 | 761..536 | 805 | 95.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:47:53 has no hits.
UFO02669.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:18:25 Download gff for
UFO02669.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| alpha4GT1-RA | 130..1004 | 1..856 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:40:11 Download gff for
UFO02669.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| alpha4GT1-RA | 123..997 | 1..856 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:41:05 Download gff for
UFO02669.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| alpha4GT1-RA | 123..997 | 1..856 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:41:05 Download gff for
UFO02669.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3022026..3022368 | 536..856 | 92 | <- | Minus |
| 2L | 3022423..3022954 | 1..535 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:40:11 Download gff for
UFO02669.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3022026..3022368 | 536..856 | 92 | <- | Minus |
| arm_2L | 3022423..3022954 | 1..535 | 99 | | Minus |
