UFO02678.5prime Sequence
349 bp (89 high quality bases) assembled on 2009-01-14
> UFO02678.5prime
CAATCCACATGCTCTCCTACGAGCCCTCATGCTCGAGGGCGGTCCTGAAA
CACCACCCTCATCGGCTCCAGCACCACGTGCCTCTGCCGCATCGGTCAAA
CTATAGCGCCTCGCAGCACGCCGATGAATATGTGCCTGACTCCCAGCCCA
CCTCTCCGGCCCTACGTATGATTTCTGAGGCGGTGGACTCTCCTTTGCAC
CAGCAGGGCAACAACTCGGTGCCGGAACGCACGGATGATTCCCACGAACT
GCCTCCTGGGGTAGGTTTACTCGGAACGGACCCCGGAATCGATGACCCGG
GCTTTGGCCCCAAGGGTTATTTTTCCCGGAGTCGGAATCCTAATCCGAA
UFO02678.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:15:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42676-RE | 1577 | CG42676-RE | 549..883 | 9..345 | 1125 | 89.6 | Plus |
| CG42676-RC | 1411 | CG42676-RC | 383..717 | 9..345 | 1125 | 89.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:15:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1803821..1804113 | 9..302 | 1090 | 92.2 | Plus |
Blast to na_te.dros performed 2014-11-28 23:15:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| invader4 | 3105 | invader4 INVADER4 3105bp | 86..133 | 99..52 | 105 | 68.8 | Minus |
| invader4 | 3105 | invader4 INVADER4 3105bp | 2845..2892 | 99..52 | 105 | 68.8 | Minus |
UFO02678.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed on 2010-07-30 09:18:17 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-05 01:15:31 has no hits.
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-29 00:04:39 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-29 00:04:39 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-05 01:15:31 has no hits.
