UFO02679.5prime Sequence
1075 bp (962 high quality bases) assembled on 2009-01-14
> UFO02679.5prime
CAGTCGACATGGTTCTGATTACTTTGACCCTGGTTTCGTTGGTGGTGGGC
CTGCTGTATGCCGTGCTGGTATGGAACTATGACTATTGGAGGAAACGGGG
CGTTCCTGGTCCCAAGCCAAAGCTATTGTGCGGAAACTATCCAAACATGT
TTACTATGAAGCGGCATGCAATCTACGATCTAGACGATATATACAGGCAG
TATAAGAACAAGTACGATGCTGTGGGCATTTTTGGCAGCCGCTCTCCACA
GCTGCTGGTGATCAATCCCGCGTTGGCGCGTCGAGTCTTTGTGTCCAACT
TTAAGAACTTCCACGACAATGAGATCGCCAAGAATATTGACGAGAAAACC
GATTTCATTTTCGCCAACAATCCGTTCTCGTTAACTGGCGAAAAGTGGAA
AACTCGAAGGGCGGACGTAACGCCTGGTCTTACGATGGGACGGATAAAGA
CAGTCTATCCGGTGACAAACAAGGTGTGCCAAAAGTTGACCGAGTGGGTG
GAGAAGCAATTGCGTCTGGGTTCTAAAGACGGCATCGATGCCAAGCACAT
GAGTCTCTGCTTCACAACAGAGATGGTCACCGATTGTGTTTTGGGTCTGG
GCGCTGAAAGCTTTTCGGATAAGCCCACACCCATAATGTCGAAAATCAAT
GATCTCTTCAACCAGCCCTGGACCTTTGTACTGTTCTTTATACTGACTAG
TTCCTTCCCATCGCTAAGTCATTTGATTAAGCTACGCTTCGTGCCAGTGG
ATGTGGAACGCTTCTTTGTCGACCTGATGGGCAGTGCGGTAGAGACACGT
CGTGCCCAGTTGGCGGCGGGAAGCAGTTCGAGCGGTCCGACTTCCTGGAC
TACATCTTGCACTGGTGAGAGCGCACCTGACATCGTCATTGCTGGCTATT
CCATGACTTTCTGCTCGACGGATTCGAACGACGCACAGTCTGCTCCCATA
CTGCTCATCTGGGTCGTATAGAGCACAGATCTCTGGCGAGAGGAGATTCG
TCCATCTGCAGATGCACCATTGCTTTGAAAGCTAACGGATTGCTACTGAA
CGCTGTGTGCAGAAACATCGATCTT
UFO02679.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:28:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp28a5-RA | 1766 | CG8864-RA | 59..1106 | 9..1030 | 4540 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:28:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13978195..13978508 | 549..861 | 1505 | 99.4 | Plus |
| 2L | 23513712 | 2L | 13977685..13977938 | 190..443 | 1255 | 99.6 | Plus |
| 2L | 23513712 | 2L | 13977360..13977548 | 9..197 | 945 | 100 | Plus |
| 2L | 23513712 | 2L | 13978002..13978107 | 443..548 | 530 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:28:28 has no hits.
UFO02679.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:18:16 Download gff for
UFO02679.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp28a5-RA | 49..1109 | 1..1033 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:57 Download gff for
UFO02679.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp28a5-RA | 50..1110 | 1..1033 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:02:57 Download gff for
UFO02679.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp28a5-RA | 50..1110 | 1..1033 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:02:57 Download gff for
UFO02679.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13977351..13977547 | 1..196 | 97 | -> | Plus |
| 2L | 13977692..13977938 | 197..443 | 100 | -> | Plus |
| 2L | 13978003..13978107 | 444..548 | 100 | -> | Plus |
| 2L | 13978195..13978706 | 549..1033 | 93 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:57 Download gff for
UFO02679.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13977351..13977547 | 1..196 | 97 | -> | Plus |
| arm_2L | 13977692..13977938 | 197..443 | 100 | -> | Plus |
| arm_2L | 13978003..13978107 | 444..548 | 100 | -> | Plus |
| arm_2L | 13978195..13978706 | 549..1033 | 93 | | Plus |
