UFO02693.5prime Sequence
1044 bp (939 high quality bases) assembled on 2009-01-14
> UFO02693.5prime
CAGTCGACATGCAAAAAACCAATAACTACAAAAGCTTCAAAATCTTCTTC
AAGAACGTTCCATTTCGTTCATATCCCGACTGCAAGAATGGTAAAGGTTC
AGGCCTAAAAGCCAAGTTGGCAAAGAAAATTCCTATAGAACGTGAAAAGT
TTTTGGGTATAAAGTGTCTGCACGGCAAGAAGATAATTGGCCAGATCAGT
GTTAATAGCGTGATTGGAGGAATGCGAGGACTTCCACTTTTGTTTTGCGA
GACATCCAGCTTGGACAAAAACAAGGGTATTTATTACCGTGGAAAACTGC
TTAAGGATGTGTGTGCCAAACTGCCACGGGTGCAAGAGGGCACACAAGAG
GGCACTCCCGAAGGATGTTTCTTCCTGCTGACCAGCGGATCGATGCCCAC
GAAGAAGGAGGCACAGGAAGTGACCAACGAGTGGCTGAAGCGGGGCTCAG
TTCCGCGCTACTGCCTCCGGATGATCGACTCCATGGACAAGCGGGTGCAT
CCGATGGCCCAATTGTGCGCCGCCAGTGCCTGTCTCAATCCGCAGAGCCA
GTTCGTCGAGGCTTACACCAAAGGGGCCAGACGTGCAGACTACTGGAAAT
ACTCCTACGAGGATTCAATGAACCTCATCGCCATGCTGCCCACCGTGGCG
GCTGCCATCTATTCTAACGTGTTTAGGGATGGCGAAGGTTCACGGGAGGT
CAACTATGAGGAGGACTGGTCCGGCAACTTCTGCCGCATGCTTGGACTAC
CCGAAAAGGATTTCGTTGATCTTATGCGGCTCTACATGATCCTGCATGCA
GATCATGAGAGCGGCAATGTTTCCGCCCATGCTTGCCACCTAGTCAGAAC
GGCGCTCAGCGATCCCTTCCTGTCTTTCTCGGCCAGCATGTGCGGCCTGG
CTGGGCACTTCATGTTGCAATCAGAAGTGCTGGTTGCTGACAAGCTAGAG
CATTGCGATGACCCCTCGATGAGAGCTAAGAGTTCATCGATGATCGCTGA
AAGGGGCAGTCATCCAGCTAACGAACCGCTGTCTCGAACCGGAT
UFO02693.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:30:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14740-RA | 1600 | CG14740-RA | 99..1116 | 9..1006 | 4625 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:30:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12061832..12062482 | 906..256 | 3240 | 99.8 | Minus |
| 3R | 32079331 | 3R | 12062549..12062756 | 259..52 | 1040 | 100 | Minus |
| 3R | 32079331 | 3R | 12062802..12062846 | 53..9 | 225 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:30:25 has no hits.
UFO02693.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:06:37 Download gff for
UFO02693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14740-RA | 91..1126 | 1..1013 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:28 Download gff for
UFO02693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14740-RA | 91..1126 | 1..1013 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:31 Download gff for
UFO02693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14740-RA | 91..1126 | 1..1013 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:11:31 Download gff for
UFO02693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12061708..12062478 | 260..1012 | 96 | <- | Minus |
| 3R | 12062549..12062754 | 54..259 | 100 | <- | Minus |
| 3R | 12062802..12062854 | 1..53 | 92 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:28 Download gff for
UFO02693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7887430..7888200 | 260..1012 | 96 | <- | Minus |
| arm_3R | 7888271..7888476 | 54..259 | 100 | <- | Minus |
| arm_3R | 7888524..7888576 | 1..53 | 92 | | Minus |
