UFO02702.5prime Sequence
963 bp (846 high quality bases) assembled on 2009-01-14
> UFO02702.5prime
CAGTCGACATGTTGAAACTATTTGCTGTGGTGCTCCTGCTGGCCAGCGTG
GCCTTGGCGGTGGAAAACTACGATGGCTACAAGATCTACGACATCAATGC
TCGCAACGCTTTTGAGAAGCAGCTGCTGCTGCGTTTGTCCGGAAATGAGG
CATACGACTTCTTTGACCTGCCCCGTTCCCTGGACGCGTCCAGTCGCGTG
ATGGTCAAGCCCGAGGATCAGGAGGGATTCGAGCACCTGCTGGAGAAGTA
CGGCGTAAACTACTCGGTGATCAACGAGAATTTCGGTGAGTCGCTGCGTC
AGGAGCGCGATGAGAACCAGAACCAGAGGTTGATGAACCTGCGATCCGCT
GAACGCAGCGTTAGCTTCAAGGCGTTCCATCGTCATGCCGAGATCAATGC
CTACCTGGATGAACTGGCTGCTGCCTATCCCAGCCGTGTATCCGTCCAGG
TGGCTGGCAAGTCGTATGAGAATCGTGACATCAAGACCATCACTATCACC
AATGGCGATGGTAAGACCGGCAAGAATGTTGTCTTCCTGGATGCTGGTAT
CCATGCTCGCGAATGGATCGCCCATGCTGGAGCTCTGTATGTGATCCATC
AGCTGGTGGAGAACTTTGCTGCCAACTCGGAACTGCTGAAGGACTTTGAC
TGGGTTATCCTGCCGGTGGTGAATCCCGATGGCTATGAATACTCCTCACA
CCACCACCCGTATGTGGCGCAAGACCAGAAAGCCAATCAGCAGTGCCTGC
TATGGAACCGATGCCCATCGCAACTTCGATTTCCATTGGGGAGAGGTTGG
TGCCTCAGCTACTCCTGCTCTGATACTTCAAGGGTGAGACGGCCTTCTCC
GAGCCGGAAACTCAGTTGATCCCGATATCCTGCTCAGTCTGACGGGACGT
GCAGTCCTACCTGACCTCCACTCCTATGCACCTACCTGCTTAATCTTGGG
GCTGAACTCTGTC
UFO02702.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:15:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8560-RB | 1334 | CG8560-RB | 47..999 | 9..954 | 4425 | 98.2 | Plus |
| CG8560-RA | 1566 | CG8560-RA | 279..1231 | 9..954 | 4425 | 98.2 | Plus |
| CG8562-RA | 1483 | CG8562-RA | 501..703 | 486..688 | 310 | 77.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:15:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7402762..7403619 | 928..76 | 3890 | 98.5 | Minus |
| 3L | 28110227 | 3L | 7403836..7403903 | 76..9 | 340 | 100 | Minus |
| 3L | 28110227 | 3L | 7398870..7399072 | 486..688 | 310 | 76.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:15:17 has no hits.
UFO02702.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:06:31 Download gff for
UFO02702.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8560-RA | 279..1231 | 9..954 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:22:06 Download gff for
UFO02702.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8560-RA | 279..1231 | 9..954 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:54:57 Download gff for
UFO02702.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8560-RA | 279..1231 | 9..954 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:54:57 Download gff for
UFO02702.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7402734..7403618 | 77..954 | 98 | <- | Minus |
| 3L | 7403836..7403903 | 9..76 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:22:06 Download gff for
UFO02702.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7395834..7396718 | 77..954 | 98 | <- | Minus |
| arm_3L | 7396936..7397003 | 9..76 | 100 | | Minus |
