UFO02710.5prime Sequence
335 bp (-60 high quality bases) assembled on 2009-01-14
> UFO02710.5prime
CGGTGCCCTGCTAACGGGTCCCAGCGTGTACTCATCGCGCCGCAGCTCGA
ATGACTCCATCATACGCACTGGCAGCTCCACGAGAACTGCCGCCATTGTG
CCCGCCAAAATGAAGTCCAATCCCATCATCATGGAACTACTTGACGAATC
TCTCAGCTGGGACTTTGATATTTTCAAATTGGAGGAGATCACCGACTACC
ACCCGCTGCTCTACCTGGGCATGGAGATGTTCCGCCGCTTCGACGTCTTT
GCCACCCTGAACATCGATGAGAACGTGTGCTAGGCGTGGTTGGAAGTGAT
TGAAGCCCACTACCGCAAGAGCAACACATATCACA
UFO02710.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:23:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pde8-RO | 4895 | CG45019-RO | 2409..2743 | 1..335 | 1645 | 99.4 | Plus |
| Pde8-RK | 5389 | CG45019-RK | 2076..2410 | 1..335 | 1645 | 99.4 | Plus |
| Pde8-RI | 5562 | CG45019-RI | 2249..2583 | 1..335 | 1645 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:23:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23677403..23677624 | 114..335 | 1080 | 99.1 | Plus |
| 2R | 25286936 | 2R | 23677248..23677347 | 16..115 | 500 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:23:13 has no hits.
UFO02710.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:06:36 Download gff for
UFO02710.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pde8-RB | 1936..2269 | 1..334 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:12 Download gff for
UFO02710.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pde8-RN | 2362..2695 | 1..334 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:59:48 Download gff for
UFO02710.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pde8-RI | 2249..2582 | 1..334 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:59:48 Download gff for
UFO02710.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23677173..23677188 | 1..16 | 100 | -> | Plus |
| 2R | 23677249..23677347 | 17..115 | 100 | -> | Plus |
| 2R | 23677405..23677623 | 116..334 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:12 Download gff for
UFO02710.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19564696..19564711 | 1..16 | 100 | -> | Plus |
| arm_2R | 19564772..19564870 | 17..115 | 100 | -> | Plus |
| arm_2R | 19564928..19565146 | 116..334 | 99 | | Plus |
