UFO02711.5prime Sequence
352 bp (-47 high quality bases) assembled on 2009-01-14
> UFO02711.5prime
CATGTCGGACATCGCTTTGCCACAGTGTTTTTTCTCGGCCTCTTGGCTAT
CAGTTACTGGGAGGAGTCCCTTGGTCATGTTGTGCCCGTGGGTCTTCCTG
CAGTCGGAACCTATCTGCTGTCTCCACCCGTTGTCTTGCTAGTCCAGCCA
CCTCCTCCTCCGCCGGAAGACGATGGCTCCTACAAGCCGCCTTCCCCCCC
CGAAGATGGCTCGTGGCATCCACAGCCTGGTCTGGAGGGAGAGTACTCGG
ACCCGGAACTAAGCCAGAGTGGCAGTGGAAGCATTACAGCCAGTGACGCA
GGAGCTGCTGCCCTGATTTTGGTTGCCTCACATCTTGTAGACGCCCAAAA
TG
UFO02711.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:23:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4000-RA | 999 | CG4000-RA | 75..409 | 18..352 | 1555 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:23:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20676881..20677206 | 352..27 | 1510 | 97.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:23:02 has no hits.
UFO02711.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:06:35 Download gff for
UFO02711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4000-RA | 71..410 | 11..352 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:04 Download gff for
UFO02711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4000-RA | 71..410 | 11..352 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:59:40 Download gff for
UFO02711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4000-RA | 70..409 | 11..352 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:59:40 Download gff for
UFO02711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20676881..20677208 | 23..352 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:04 Download gff for
UFO02711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16502603..16502930 | 23..352 | 97 | | Minus |
