UFO02712.5prime Sequence
424 bp (-107 high quality bases) assembled on 2009-01-14
> UFO02712.5prime
CAGTCGACATGATGGGTGGCGGTGGTGGCGTTGCTGGTGCGGGCTTTTCC
GCGGGCGCCAGTGGCCCAATGCTGGGTGCTGGCGGTCACATGCTGATGGG
TGGCCAGGGGCATCAGGTGCATCTGCAGCACCAGACGCTCTTGCCCGTCA
AGATGGATAAGCTGGTGCCAAACTATGATAATGCCGAGCATCAAATGAAA
TTTTACGACATCAGATCGCCGCTCGTTCTCAGCTGCAACGTGAAAGACGG
TACGCCGGGCGGCGTGCTCATATGGAAAAAGAACGGCACCGCTGTGACGG
ATGTACCTTCTCTCAGAGGTCGCTTTAAGTTAATCGCAGACGATAACAAG
TTCATCATCGATAAGACGGATACGAACGACGATGGCAAATACAGTTTGCG
AGTTTGACGGCGTGTCAAAGGAAA
UFO02712.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:48:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Bsg-RG | 8453 | CG31605-RG | 1533..1948 | 8..424 | 2030 | 99.3 | Plus |
Bsg-RB | 2744 | CG31605-RB | 445..712 | 156..424 | 1290 | 98.9 | Plus |
Bsg-RH | 3001 | CG31605-RH | 702..969 | 156..424 | 1290 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:48:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8103355..8103503 | 8..156 | 745 | 100 | Plus |
2L | 23513712 | 2L | 8106839..8106988 | 274..424 | 675 | 98 | Plus |
2L | 23513712 | 2L | 8105691..8105810 | 156..275 | 600 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:48:11 has no hits.
UFO02712.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:06:33 Download gff for
UFO02712.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Bsg-RG | 1461..1880 | 1..421 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:40:21 Download gff for
UFO02712.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Bsg-RG | 1526..1945 | 1..421 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:41:16 Download gff for
UFO02712.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Bsg-RG | 1526..1945 | 1..421 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:41:16 Download gff for
UFO02712.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8103348..8103503 | 1..156 | 97 | -> | Plus |
2L | 8105692..8105809 | 157..274 | 100 | -> | Plus |
2L | 8106840..8106985 | 275..421 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:40:21 Download gff for
UFO02712.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8103348..8103503 | 1..156 | 97 | -> | Plus |
arm_2L | 8105692..8105809 | 157..274 | 100 | -> | Plus |
arm_2L | 8106840..8106985 | 275..421 | 97 | | Plus |