Clone UFO02712 Report

Search the DGRC for UFO02712

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:27
Well:12
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO02712.5prime Sequence

424 bp (-107 high quality bases) assembled on 2009-01-14

> UFO02712.5prime
CAGTCGACATGATGGGTGGCGGTGGTGGCGTTGCTGGTGCGGGCTTTTCC
GCGGGCGCCAGTGGCCCAATGCTGGGTGCTGGCGGTCACATGCTGATGGG
TGGCCAGGGGCATCAGGTGCATCTGCAGCACCAGACGCTCTTGCCCGTCA
AGATGGATAAGCTGGTGCCAAACTATGATAATGCCGAGCATCAAATGAAA
TTTTACGACATCAGATCGCCGCTCGTTCTCAGCTGCAACGTGAAAGACGG
TACGCCGGGCGGCGTGCTCATATGGAAAAAGAACGGCACCGCTGTGACGG
ATGTACCTTCTCTCAGAGGTCGCTTTAAGTTAATCGCAGACGATAACAAG
TTCATCATCGATAAGACGGATACGAACGACGATGGCAAATACAGTTTGCG
AGTTTGACGGCGTGTCAAAGGAAA

UFO02712.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:48:12
Subject Length Description Subject Range Query Range Score Percent Strand
Bsg-RG 8453 CG31605-RG 1533..1948 8..424 2030 99.3 Plus
Bsg-RB 2744 CG31605-RB 445..712 156..424 1290 98.9 Plus
Bsg-RH 3001 CG31605-RH 702..969 156..424 1290 98.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:48:10
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8103355..8103503 8..156 745 100 Plus
2L 23513712 2L 8106839..8106988 274..424 675 98 Plus
2L 23513712 2L 8105691..8105810 156..275 600 100 Plus
Blast to na_te.dros performed on 2014-11-28 21:48:11 has no hits.

UFO02712.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:06:33 Download gff for UFO02712.5prime
Subject Subject Range Query Range Percent Splice Strand
Bsg-RG 1461..1880 1..421 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:40:21 Download gff for UFO02712.5prime
Subject Subject Range Query Range Percent Splice Strand
Bsg-RG 1526..1945 1..421 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:41:16 Download gff for UFO02712.5prime
Subject Subject Range Query Range Percent Splice Strand
Bsg-RG 1526..1945 1..421 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:41:16 Download gff for UFO02712.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 8103348..8103503 1..156 97 -> Plus
2L 8105692..8105809 157..274 100 -> Plus
2L 8106840..8106985 275..421 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:40:21 Download gff for UFO02712.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8103348..8103503 1..156 97 -> Plus
arm_2L 8105692..8105809 157..274 100 -> Plus
arm_2L 8106840..8106985 275..421 97   Plus