UFO02714.5prime Sequence
934 bp (826 high quality bases) assembled on 2009-01-14
> UFO02714.5prime
CAGTCGACATGGACGACGATGAGCTGATTAAATTGATAGAGAGACACCCG
ATCCTGTACGACAAGGACTGCGCGAGGAGCGTGAAGAATGCGGCGCAAAA
GGACGCGGCCTGGAAGGCCATCTCCCAGAAGTTAGGAGCCTCGGAACGGG
CGTGCATTACGCGCTGGAAGAGCATTCGCGATCGTTTCGGCAAGGAGTTT
CGCCGTTTCCAGGAGCGTCCGGATGAGCCCACCTACTGGGACATGTTTCC
GCGACTGCTCTTTCTCAAGGATCACTACAAACAGGGACTGGCAAGGAACG
AGAGTCTCGACGGGATGCGTTTTGAGCCCAGGGAGCGGAAAAAGCGCACA
AAAGTGGACATGGAGCAGGAGAGGCGGAGAAAGGACGAGGAGGAGGAGGA
CTCCCAGGATGACCTGCTGAACGAGCAGCTCATTGAGCTGGTCAAGTCTC
ATCCCGTGCTGTATGATCGTCACAAGATCAGAGTCTCCAAGAACCTAGCA
GCGAAAAACGAAGCCTGGCGAGAGATCTCTGAAAACCTAAATGTGTCGGA
GGAACTTTGCTACAACCGCTGGAAGAAGCTGCGTGATCGTTTCGGGCGGG
AGTTCCGCAGTCATCAGATCAACCAGTCCACGCCCATCACGTGGAGGTAC
TTTAACGACCTTCTCTTTCTGGGCCGCCACTTCCGCAAGGAGTGCCCCTG
GGTTTTGGAGAACATCAAGCGACGTGACGACCACCCAAAGCAGGAAATCC
TTCCGGAAAGACCACCAACAGCCGGAGGGAATGGTGATCTCCAGTGTTGA
GCAAATCTGGGGGGCTGATTACCCCTACAGTACGGACACGACGATCTGGA
GGATGATCTGAGTGGCCTACATGAAAGATGGAATCTTACCGGAGGCGAAT
TAGCACGCCTGTCATTTATCCTCCGGAGACCGTC
UFO02714.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:34:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10949-RB | 1689 | CG10949-RB | 215..1111 | 9..897 | 4105 | 97.9 | Plus |
| CG10949-RA | 1539 | CG10949-RA | 65..961 | 9..897 | 4105 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:34:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20416164..20416704 | 549..9 | 2690 | 99.8 | Minus |
| 2L | 23513712 | 2L | 20415794..20416107 | 859..549 | 1265 | 97.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:34:11 has no hits.
UFO02714.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:18:09 Download gff for
UFO02714.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10949-RA | 209..1095 | 1..882 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:52 Download gff for
UFO02714.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10949-RA | 59..945 | 1..882 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:36 Download gff for
UFO02714.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10949-RA | 59..945 | 1..882 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:36 Download gff for
UFO02714.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20415794..20416106 | 550..859 | 97 | <- | Minus |
| 2L | 20416164..20416708 | 1..549 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:52 Download gff for
UFO02714.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20415794..20416106 | 550..859 | 97 | <- | Minus |
| arm_2L | 20416164..20416708 | 1..549 | 99 | | Minus |
