UFO02717.5prime Sequence
1034 bp (932 high quality bases) assembled on 2009-01-14
> UFO02717.5prime
CAGTCGACATGTTGGGTGTTCTACGTATCCAAGGAGCGTTGGCTTCGGCG
GGGCAGGCGCGTCTTCTGTCCGTCCGCCTGCTGGCCAGCAAATCCACCAC
TGACATGACCACAAACCGCGGTGAATCCACACAATCGACGTCCACCGAAC
ACTTTGATATAATCATCGGAGGCGGCGGACTGGTGGGCACCACATTGGCC
GCAGCTCTGGCCAAGAACTCGACGTTGGCGGACAAGAAGGTACTGCTGCT
GGAAGGTGCGCCCGAGTTCCGGGGATTTAATCCCACTGGGCCATACCAGA
ATCGCGTATCCGCCATCAATCACAACTCCATCGAGCTGTTCAAGTCCATT
GATGCGTGGAAGCACATCGAGTCGGCGCGCTACAAGCCCGTCAAGCAGAT
GCAGGTGTGGGAGTCCAACACGGACGCACTGATCCAGTTCCAGCACGATA
ACTTTGCCAGCGACGTGGCCTGCATCATTGAGAACGATTTGATCCTGGAT
GCGGTCTATGCGCTGGCCAAGGAATCACCCAATGTGGAGATCCTCAACAA
GGCCAGAATCCAGTGCGTTCGCCTGCCCAGGGACTCCAACTCCAATCACT
CCGAGCTGCAGCTAGAGGATGGACGCAACTTTTCCTGCGATTTGCTGATC
GGAGCGGATGGCGCCAATTCCGTGGTCAGAAAGGAGATGAACGTGGATGT
ATTTTCCCTGAACTACGACCGCATGGGCCTGGTGGCTACGCTGGAACTCG
GCGAAGATGCCTGTGATAATTCCGTGGCGTGGCAGAGGTTTCTGCCCAAT
GGACCAGTGGCACTGCTACCACTAACGGACAGGCTGAGCTCCCTGTCTGG
AGCACCACCAACGAGCAGCGAAATGCTGCAGCCCTACCACCCACAGAATT
CGTAGACGCCTCACGAGCTTCTGCAGCAGTATCGCGCGTGAGCTCGCAGA
CAGCTGTCAGCGCTGACTCCTGTTGAACAACGCAGCAGCACCAGTGCATA
TCCGCACGGTGCCGGCTGCTGACAGTCCGGTGCC
UFO02717.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:06:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7277-RA | 1604 | CG7277-RA | 77..1097 | 9..1005 | 4510 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:06:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5531242..5532147 | 910..9 | 4330 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:06:21 has no hits.
UFO02717.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:18:05 Download gff for
UFO02717.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7277-RA | 49..1027 | 9..971 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:35 Download gff for
UFO02717.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7277-RA | 77..1055 | 9..971 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:47:50 Download gff for
UFO02717.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7277-RA | 77..1055 | 9..971 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:47:50 Download gff for
UFO02717.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5531169..5532147 | 9..971 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:35 Download gff for
UFO02717.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5531169..5532147 | 9..971 | 98 | | Minus |
