UFO02730.5prime Sequence
1074 bp (890 high quality bases) assembled on 2009-01-14
> UFO02730.5prime
CAGTCGACATGTTGGTGGTTTTGTTGGTGGCCCTCCTGGTGACTCGCCTA
GTGGCCTCGCTGTTCCGTTTGGCGCTAAAGGAGCTTCGACATCCTTTGCA
AGGCGTTGTGCCAAGTGTTTCGAGAGTTCCTCTACTAGGAGCCGCCTGGC
AGATGCGGAGTTTTCAGCCAGACAACTTGCATGATAAGTTCGCCGAGTAT
GTTAAGCGTTTTGGTCGCAGTTTCATGGGCACTGTCTTAGGCCATGTGGT
TATGGTTACAGCGGAGCCCCGACATATCGATGCACTGCTGCAGGGTCAGC
ATCAGTTGAAGAAGGGCACGATGTACTTTGCCTTACGCGGTTGGCTGGGC
GATGGACTGCTGCTGAGTCGTGGAAAGGAGTGGCACACGATGCGCAAAAT
CATCACGCCCACGTTTCACTTTAGCATCCTGGAGCAGTTTGTCGAGGTCT
TCGATAGGCAGAGCAGCATATTAGTGGAGCGTTTGAGAACGCTGTCGTAC
GGCAACGAGGTCGTGAACATCTATCCCTTGGTGGGCTTGGCTGCCCTAGA
CATAATCACCGAAACTGCTATGGGCGTGAACGTGGACGCTCAAGGAGCTG
ACTCTGAGGTGGTGCACGCTGTAAAAGATCTAACCAACATCTTGGCCACC
AGGTTCATGAGGCCGCATCTCCTCTTTCCCCACCTCTTTCGCCTGTGCTG
GCCCAGCGGATTCAGAAAGCAACAGGCAGGAGTCATCTGCCTCCATGAGT
TTACCAACGGAATTATTAGAGCAGCGACGCCGTTTACTGGGCCAGGAGGC
TATTCAAGATAAGCCACAAAGCCCCACGCCCTGCTGGACCACGCTCCTGC
GGGCAACTTGTGATGGGCAACATTGACTGACAGCAATTCGCAATGAGTGA
AACTTTCATCTTTGGAGGGTCACGATACGACGACTTCACGGTTTCCTTCT
GTTTGTATCTGCTTTCCCGCCATGAGCAAGGCAACAAAGCTTTTGAGGAA
CTGAGATGCCTACGGCAGGATTAATCAAGGCTTATCTCTCGGATTCCGAG
TACCGTATCTAGCTTGCGTGTCAA
UFO02730.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp4ae1-RA | 1822 | CG10755-RA | 89..1141 | 7..1045 | 4615 | 97.3 | Plus |
| Cyp4d8-RA | 1573 | CG4321-RA | 319..432 | 342..455 | 215 | 82.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2179317..2179770 | 175..628 | 2270 | 100 | Plus |
| X | 23542271 | X | 2179826..2180177 | 629..976 | 1160 | 94.4 | Plus |
| X | 23542271 | X | 2179095..2179262 | 7..174 | 840 | 100 | Plus |
| 3L | 28110227 | 3L | 7494829..7494942 | 455..342 | 195 | 78.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:16:03 has no hits.
UFO02730.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:08:44 Download gff for
UFO02730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp4ae1-RA | 207..1240 | 1..1025 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:22:37 Download gff for
UFO02730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp4ae1-RA | 84..1117 | 1..1025 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:55:25 Download gff for
UFO02730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp4ae1-RA | 84..1117 | 1..1025 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:55:25 Download gff for
UFO02730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2179090..2179262 | 1..174 | 98 | -> | Plus |
| X | 2179317..2179770 | 175..628 | 100 | -> | Plus |
| X | 2179826..2180232 | 629..1025 | 93 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:22:37 Download gff for
UFO02730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2073123..2073295 | 1..174 | 98 | -> | Plus |
| arm_X | 2073350..2073803 | 175..628 | 100 | -> | Plus |
| arm_X | 2073859..2074265 | 629..1025 | 93 | | Plus |
