UFO02731.5prime Sequence
1060 bp (977 high quality bases) assembled on 2009-01-14
> UFO02731.5prime
CAGTCGACATGATGAGCGTTTGCATAATTGGGGCCGGAACCGCGGGTCTT
TGCTGTGCCCGCCATTCGATTGCAAATGGGTTCGAGACCACTGTGTTCGA
GCTATCTGACCGAATCGGCGGCACCTGGGTTTACAATGAGGCAACAGGGG
CGGTCAATGGCATCGATGTCCACAGCAGCATGTACAAGAACCTACGAACC
AACCTGCCCAAGGAGGTAATGGGCTTCCCGGACTTCGAAATCGGGGCAAA
CGAGGCTTCCTATGTGAGATCCGACGAGATCTGCGACTTCCTTAACCAAT
ACGCGAACCATTTCGACCTGAAGAAGCACATCAAGTTCGATAGCTATGTG
ATTCGAGTTTTGCAGAGGAAAACAAAGTGGCAAGTACTTTTCAAAGACTT
GGTCACCAACAAGATAGAGTTCCAGTACTTCGACAAGGTCTTGGTGGCCA
ATGGCCACTACCACACTCCGAATTATAGCCAAATTCCGAATATGGAAAGG
TTTAAAGGGCAGTTCCTGCACAGCCACGACTTCAGAAGTAGGGAGGTTTT
CGAAGGTAAATCCGTTCTGGTCATTGGAGCTGGTCCCAGTGGCATGGACC
TGTCGAACATCATTTCCCGAACGGCGGATCGGGTCACCATAAGTCACCAC
TTGACCGATATCGGGCAACACTCATTCTTCGAGAACGTACAGCAGAAACC
CGATGTGCGGGAGCTCGATGAGAAAGGGAGCCTTTTTCGTGGACGGATCG
TACCAGGAGTTCGACACCGTCTTCTTTTGCACAGGTTACAAGTACGCCTT
TCCCTTCCTGACCGTCGACTCGGGCATCTATGTGGAGGACAACTACGTCC
AGGAGCTGTACAGCAGTGCATCACATCAGGAACCCATCATGGCTCTGATC
GGACTGCGTTACGTTTGTGCCGCCCAAATGATGGACATCAGGCGAGGTCA
TCATGAAGCTACTACAACGGATCAACGAGTGCGTCCACGAGGAATGCTCA
GGAACCCCGCGATGGATGGCAACTGTGGGGCGGAGGACTAAGAAACCATG
CCAATGGCTG
UFO02731.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:05:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fmo-1-RA | 1454 | CG3006-RA | 105..1156 | 9..1045 | 4715 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:05:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23963772..23964198 | 553..973 | 1685 | 97.2 | Plus |
| 2R | 25286936 | 2R | 23963306..23963496 | 196..386 | 955 | 100 | Plus |
| 2R | 25286936 | 2R | 23963060..23963247 | 9..196 | 940 | 100 | Plus |
| 2R | 25286936 | 2R | 23963542..23963721 | 380..559 | 885 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:05:47 has no hits.
UFO02731.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:08:44 Download gff for
UFO02731.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fmo-1-RA | 79..1097 | 1..1007 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:16 Download gff for
UFO02731.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fmo-1-RA | 98..1116 | 1..1007 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:47:32 Download gff for
UFO02731.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fmo-1-RA | 98..1116 | 1..1007 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:47:32 Download gff for
UFO02731.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23963546..23963717 | 384..555 | 100 | -> | Plus |
| 2R | 23963053..23963247 | 1..196 | 97 | -> | Plus |
| 2R | 23963307..23963493 | 197..383 | 100 | -> | Plus |
| 2R | 23963775..23964239 | 556..1007 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:16 Download gff for
UFO02731.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19850830..19851016 | 197..383 | 100 | -> | Plus |
| arm_2R | 19851069..19851240 | 384..555 | 100 | -> | Plus |
| arm_2R | 19850576..19850770 | 1..196 | 97 | -> | Plus |
| arm_2R | 19851298..19851762 | 556..1007 | 96 | | Plus |
