UFO02732.5prime Sequence
1041 bp (929 high quality bases) assembled on 2009-01-14
> UFO02732.5prime
CAGTCGACATGGACGCCACTAACAATGGAGAATCCGCCGACCAGGTGGGC
ATCAGGGTGGGCAATCCGGAGCAGCCCAACGATCACACAGATGCCCTGGG
CTCCGTGGGATCCGGAGGAGCGGGTAGCAGCGGCCTGGTCGCAGGATCCT
CGCATCCTTACGGCAGCGGAGCCATTGGGCAGCTGGCCAACGGGTACAGC
TCACCCTCGTCCAGCTACCGTAAGAATGTAGCCAAAATGGTCACCGACCG
CCATGCAGCCGAGTACAACATGCGCCACAAGAACCGCGGAATGGCACTGA
TCTTCAACCATGAGCACTTCGAGGTGCCCACCTTGAAGTCTCGCGCGGGA
ACCAATGTGGACTGCGAGAATCTGACTCGGGTGCTCAAGCAGCTGGACTT
CGAAGTGACCGTGTACAAGGACTGCCGCTACAAGGACATTTTGAGGACAA
TCGAGTATGCAGCGTCGCAGAATCACAGCGATAGTGATTGCATCCTGGTC
GCCATCCTGTCGCACGGCGAGATGGGCTACATCTACGCCAAGGACACACA
GTACAAGCTGGATAACATCTGGAGCTTCTTCACGGCCAATCACTGCCCCT
CGCTAGCCGGCAAACCCAAGTTGTTCTTCATACAGGCCTGCCAGGGCGAC
AGATTGGATGGCGGAGTGACCATGCAGCGTTCTCAGACGGAAACCGATGG
CGACTCCTCGATGAGCTACAAGATTCCAGTGCACGCCGACTTTCTGATCG
CCTACTCGACGGTTCCTGGATTCTATTCGTGGCGCAACACCACCCGCGGC
AGCTGGTTCATGCAGAGCCTGTGCGCGAACTGGCGGCCATGGCAAGCGGC
TGGACATCCTGACCCTGCTCACATTCGTGTGCCAGCGGGTGGCCGTGAAC
TTTGAGTCCTGCACCGAAACCTCCGGAGAATGCACAGCAGAGCAGATCCC
TGCCATACCACCATGCTTGACCGGCATCTGCGTTCACGACAGCATGCACC
AGCGGACGGGTGGCAGCTTTCTTAACATCGTGGGCGCGGGC
UFO02732.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:21:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Drice-RA | 1927 | CG7788-RA | 240..1256 | 8..1011 | 4555 | 97.5 | Plus |
| Dcp-1-RA | 1749 | CG5370-RA | 854..1267 | 497..908 | 460 | 75 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:21:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29799897..29800806 | 8..915 | 4435 | 99.7 | Plus |
| 2R | 25286936 | 2R | 23552592..23552855 | 497..760 | 405 | 76.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:21:32 has no hits.
UFO02732.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:08:43 Download gff for
UFO02732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ice-RA | 239..1156 | 1..921 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:03 Download gff for
UFO02732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ice-RA | 234..1151 | 1..921 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:53 Download gff for
UFO02732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Drice-RA | 234..1151 | 1..921 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:53 Download gff for
UFO02732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29799891..29800808 | 1..921 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:03 Download gff for
UFO02732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25625613..25626530 | 1..921 | 98 | | Plus |
