UFO02734.5prime Sequence
1020 bp (853 high quality bases) assembled on 2009-01-14
> UFO02734.5prime
CAGTCGACATGTTTTCGCTGATTTTATTGGCCGTAACGCTATTGACTTTG
GCGTGGTTCTATCTGAAGCGCCACTATGAGTACTGGGAGCGACGCGGATT
TCCATTTGAAAAACACTCCGGGATTCCATTCGGTTGCTTGGACAGTGTGT
GGCGGCAGGAGAAGAGCATGGGCTTGGCCATCTACGATGTGTATGTGAAG
AGTAAAGAGCGCGTCTTGGGCATTTATTTGCTCTTCCGTCCGGCTGTTTT
GATCAGAGACGCCGATCTGGCTCGCCGTGTTCTGGCCCAGGATTTCGCCA
GTTTCCACGATCGCGGCGTTTACGTTGATGAGGAACGGGATCCCCTGTCG
GCCAATATCTTCTCGCTTCGCGGTCAGAGCTGGCGATCGATGAGGCACAT
GTTGTCGCCATGTTTCACATCCGGAAAGTTGAAGAGCATGTTCAGCACAT
CCGAGGATATTGGTGACAAGATGGTGGCCCATCTGCAAAAGGAGCTGCCG
GAGGAGGGCTTCAAGGAGGTGGACATAAAGAAAGTGATGCAAAAACTATG
CCATTGACATTATAGCCTCGACTATCTTTGGCTTGGATGTAATAGCTTCG
AAAATCCTGATAACAAGTTCCGTAAAACTGGTGTCGTTGGCCAGAGCCAA
TAATAGATTCAATGCCATGTTCGGCATGATGATCTTCCTGGTGCCTTCGA
TAGCACAGTTCCTATTCAGAATAGGTTTTAAAAATCCAGTTGGCCTGCCA
TGTTGCAGATTGTCAAGGGAACCGTTGAGTATCGCGAGAAACTGAAATTA
GTGCGCAGGATCTGTTGCAGTTGCCTCATTCGCTGAGGATACCGGCAAGA
TAGACGAGATTGACGAAAAGTCCTTTAGCATTCAGAAAACCCCCGAAGGT
CAATATTAAAACCTATCCTTGGAGGCCTCACCGCTCAAGCTTTTATATTT
ACATCGCTTGTTAGGAAACACCGGTATCGCATGCTGCCTTTATCATCTAA
AATTGGCTAATATCTAAAGC
UFO02734.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:26:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6d4-RA | 1872 | CG12800-RA | 72..1072 | 4..999 | 4370 | 96.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:26:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22698396..22699085 | 9..699 | 3295 | 99.4 | Plus |
| 3R | 32079331 | 3R | 22699142..22699346 | 699..900 | 620 | 90.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:26:12 has no hits.
UFO02734.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:08:49 Download gff for
UFO02734.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6d4-RA | 64..1042 | 1..974 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:11 Download gff for
UFO02734.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6d4-RA | 70..1048 | 1..974 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:01:34 Download gff for
UFO02734.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6d4-RA | 70..1048 | 1..974 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:01:34 Download gff for
UFO02734.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22698388..22699084 | 1..698 | 99 | -> | Plus |
| 3R | 22699142..22699344 | 699..898 | 93 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:11 Download gff for
UFO02734.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18524110..18524806 | 1..698 | 99 | -> | Plus |
| arm_3R | 18524864..18525066 | 699..898 | 93 | -> | Plus |
