UFO02755.5prime Sequence
1080 bp (965 high quality bases) assembled on 2009-01-14
> UFO02755.5prime
CAGTCGACATGAGTGGCAAGCAGGTAGTCATCCTTCTGGGCAGTGTCCTG
ATCCTGGGATGCTTACAAGTGGCAGCGGCAACGGAAACGGATAACAAAAC
CAACGATTTCGTGGCCACCGACGAATGGCAGACGATTGCGGAAGGTCAAG
CTATTCCAAGGGGCCTGCACGTGCGCATCAACCTACAAACGGGGCTCAAG
GAAGCCAAACTCTTAGACGAAAGCGAACGTGGCACGTCGCTGCAGAGTCA
ACCGGATGATCAGAATGCTCGGGAATCTCACGATGACAACGAACCCCTGG
CTCTGGACTATAAACCGGACATAATCGAGGAGTCTATACGGCGGGTCAAG
GAGCAGAAGAAGAGCTATGCCGAGCTACGCAAAGCGTACAAAGAGTTCCA
GAAGAACTTTCGCACCGACGGAGAACTGATCGTCCAGTTAATCGATCAGT
TTCGGAACTTCAGCAGAACGCCGCTAGAGTCAGAGATGCGCTCCAAGCTG
GACTGCCTGGAAAATCTGGAGTATTTGCTCCATCAGATAGACAATGCCTT
GATGTTCATTGATAATGGGGGATTGGATGATGTACTACTGCCCATTGTTG
TGAACGATACCAGTACATCCCTGAGAGTGTCGGCCATGCGTGTGTTGGGC
TCGCTGGCGAGCAACAATCCCAAGGCCCAGATCAAGGTGTTCGAAAAGAA
TTTCGGGTCTCATCTGGCTCAGATTCTGACCAGTTCCGGAAATGTCGGTG
AGATCTCCGCTGCATTGCACGCCTTTGGAGCCTTGTTGCGGAAATTTCCG
CTAGCCCAGCAGCGAGTGCTTTCCACCTCGGGTACACAGGCTCTGATCAA
GGTGCTCCAGAGTCCGGATGTGGAGCTGCGGAGCAGCGAAAGTAGTGACT
CTCATAAGCGACTAGTGCTGGAGAGCGGTCAGTGCTGATGTCAGCAAGAT
GATCCCGAGCCTCATCACATGCGCCAATTTGTGCTCTTGACTCGAGTCTG
GCTGAAACGCCGGCTACTTGGCCGGCGGTGAACCTGGTGCTACAAGGATT
CCTGCTCCTCCTTAGAGGCACCCGGAAGGT
UFO02755.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:45:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10420-RA | 1831 | CG10420-RA | 133..1214 | 9..1076 | 4765 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:45:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25234379..25235200 | 958..143 | 3830 | 99.1 | Minus |
| 3R | 32079331 | 3R | 25235260..25235397 | 146..9 | 690 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:45:54 has no hits.
UFO02755.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:08:25 Download gff for
UFO02755.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10420-RA | 118..1206 | 1..1080 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:39:02 Download gff for
UFO02755.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10420-RA | 129..1217 | 1..1080 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:40:10 Download gff for
UFO02755.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10420-RA | 129..1217 | 1..1080 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:40:10 Download gff for
UFO02755.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25234250..25235198 | 145..1080 | 96 | <- | Minus |
| 3R | 25235262..25235401 | 1..144 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:39:02 Download gff for
UFO02755.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21059972..21060920 | 145..1080 | 96 | <- | Minus |
| arm_3R | 21060984..21061123 | 1..144 | 97 | | Minus |
