UFO02756.5prime Sequence
1076 bp (910 high quality bases) assembled on 2009-01-14
> UFO02756.5prime
CAGTCGACATGAACCGTTCGAACAGCTTTGTCAGCTCGCTGAAATGGTGG
CCACTGCAGGGTCACAACAACCAACCGGTGGCGCCACCTGCCAGCGGTTA
CTCCCAATCGGCGCCCAGCTCGCCCACCTCCAATTGGCCACCGCCACTGC
AGCAGCATCAGAATCCCACAACCGGCACCGCCCACCGCCTACTGCCGCCC
AGCGGGCAAAAGAATGGAATTGCTGGCGGCACCGTGGGCGCCACATTCGG
CAGCAGTGTGGCAGTGCAAAAGCTGCGCGAATCCAAGTGGTTCAAGCCCG
AGGAGCAGCGCATCTTTTGCGCCGTCGTCGAGTGCGGTTTCGTGGTCGAG
ATCCGCAGCAGCGCCGCAGCCGAGGCGGCCGCAGCTAACGCAGCAGCAGC
GGCCGCAGCAGCCGACACCGGTGACAACGACCTCGACGTGGACGCTCTGG
AGGAGCTCGACTGCCCACTGACCAACCACCCATCGCCGCCGCATCGCAAT
CACAGCCATAGTCACAGCCAAATCCAAAACCAATCCCAGCGGCTGGTCAT
CCCGCGCAACGGTAGCAGTTTCCTGGAGACGCAGGACGAGAATGAGACGC
CTGTCGCCTCTTGGTATGGAATCGTGCTCTGCAAGGTGGCCAAAGACAAT
AAACCCAAGCCGGAGACCATTGAGATATATTCGGTGAAAAATCCGTGAGA
ATGGTACATACAAGTTGATCAAGATGCAATTGGCGGATATTTGGAGTCAC
GGATGGGAGCTGCGTATCAATAACTTTGCCGACAAGGAAAAGGTGCCGCA
CAACGAGAAGGATATTCGCAATCATGTGTCGGGTGGCCGCGCAAGCAAAA
CAGAAGTCTTGTGGAACAATAATAAGCATTTTGTGTACTGGGTGGCCGCT
TACCGGAAGTCGTTCAGCAAGATTCTTGCGAAAGCGACAAGGTTACCGAC
GATTGCCCTTCACGGTGCTGGCTGCACCTTGATTCATTGCAGCTTTCTAG
ACCATTCGTTTGGGGCGGCGGGTCCAGGTATTGTCAATATCTTATCATAT
TCTATTCATATTCACAACTGGCCTTA
UFO02756.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:21:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(1)G0469-RD | 3709 | CG32597-RD | 388..1343 | 9..979 | 4330 | 97.5 | Plus |
| l(1)G0469-RA | 1761 | CG32597-RA | 388..1343 | 9..979 | 4330 | 97.5 | Plus |
| l(1)G0469-RC | 2729 | CG32597-RC | 388..1307 | 9..939 | 4290 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:21:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 14210434..14211070 | 645..9 | 3185 | 100 | Minus |
| X | 23542271 | X | 14206594..14206777 | 828..644 | 860 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:21:28 has no hits.
UFO02756.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:08:24 Download gff for
UFO02756.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)G0469-RB | 351..1286 | 1..948 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:00 Download gff for
UFO02756.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)G0469-RA | 380..1323 | 1..957 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:51 Download gff for
UFO02756.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)G0469-RA | 380..1323 | 1..957 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:51 Download gff for
UFO02756.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 14206597..14206775 | 646..825 | 98 | <- | Minus |
| X | 14210434..14211074 | 1..645 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:00 Download gff for
UFO02756.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14100630..14100808 | 646..825 | 98 | <- | Minus |
| arm_X | 14104467..14105107 | 1..645 | 99 | | Minus |
