UFO02760.5prime Sequence
1057 bp (954 high quality bases) assembled on 2009-01-14
> UFO02760.5prime
CAGTCGACATGTGGTCGCCGCGGGTTGCCCTACTTTTCCTGGCCCTAGCA
CTTAGCCAACCGGACGAGTTGGTGGAGGCCGCTGGTCCGCTGAAGGTGCT
GGGTCTTTTTCCCCATCCCGGAGTTAGCCACTTCCACTTCTTCCACCCCA
TCATGAAGGGTCTGGCCGAGGCGGGTCATGACGTGAGCGTGGTTTCCCAC
TTCCCGGACAAGCATCCGGTTGCCCACTACAAGGATTTCCCCCTCACCGG
AATGGACAAGCTCACGAACAGTGTTGATCTCAAGTTTTTCGAGAAGCGCA
CATTCTACAGTCACTTCCAGGAGTTCTTCCTGCTGTACGACTGGGGCAAA
CAGACATGCAACCTGACGCTCCGTTCGGAAGCACTGCAGCAGATCCTCAG
GCGTCCGGGACGCTTTGATGTGATCATCATGGAGCAATTCAACACTGACT
GCATGATGGGAGTGGCCCACCAGCTCCAGGCGCCGGTGATCGCCTTGAGC
AGCTGTGTGATGATGCCCTGGCACTACGAGCGAATGGGAGCTCCTTTGAT
ACCCTCTCACATCCCGGCGCTCTTCATGGCCCAGTCGCAGCACATGAACT
TTGGGGGACGACTGGCCAATTGGTTCAGCACCCACGCCTTAAATTGGATG
TACAAATTACTATCGGTTCCCGCTGCCGACGCCATGGTTCAGTACAAATT
CGGCCATGACGTGCCTTCGGTGGGCGAGCTGGTGAAGAACACATCCATGT
TCTTTGTGAACCAGCACTACTCGCTGTCTGGACCCAAAGTAACGCCGCCC
AATGTCATCGAGCTGGGTGGCATCCACATCCAAAAATCGAAGCTCTGCCT
GCCGATCTGCAGCGCATTCTGAACAATGCTGAGAAGGAGTGATCCTGATT
AGTGGGGATCATGATCCGGGCGAATTCCCTGTCCGCGCGAAAAGGATGCA
TTATTCGCGTGGCTCGATTAAGCAGAAGTTATCTTGAATGGGAAACGAAA
CCTGCTTACAGCACACATGCCAATATGAAGTGTGCCAACGCGAATTCCTT
GGCATTC
UFO02760.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:46:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17323-RD | 2212 | CG17323-RD | 140..1146 | 9..1001 | 4620 | 98.1 | Plus |
| CG17323-RC | 1988 | CG17323-RC | 79..1085 | 9..1001 | 4620 | 98.1 | Plus |
| CG17323-RE | 2112 | CG17323-RE | 203..1209 | 9..1001 | 4620 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:46:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18824795..18825167 | 283..655 | 1865 | 100 | Plus |
| 2L | 23513712 | 2L | 18824306..18824581 | 9..284 | 1380 | 100 | Plus |
| 2L | 23513712 | 2L | 18825234..18825519 | 656..937 | 1170 | 97.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:46:01 has no hits.
UFO02760.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:08:28 Download gff for
UFO02760.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17323-RA | 31..1045 | 9..1008 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:39:05 Download gff for
UFO02760.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17323-RE | 203..1217 | 9..1008 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:40:13 Download gff for
UFO02760.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17323-RE | 203..1217 | 9..1008 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:40:13 Download gff for
UFO02760.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18824306..18824581 | 9..284 | 100 | -> | Plus |
| 2L | 18824797..18825167 | 285..655 | 100 | -> | Plus |
| 2L | 18825234..18825601 | 656..1008 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:39:05 Download gff for
UFO02760.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18824306..18824581 | 9..284 | 100 | -> | Plus |
| arm_2L | 18824797..18825167 | 285..655 | 100 | -> | Plus |
| arm_2L | 18825234..18825601 | 656..1008 | 94 | | Plus |
