UFO02772.5prime Sequence
1064 bp (986 high quality bases) assembled on 2009-01-14
> UFO02772.5prime
CAGTCGACATGGCCAAGTACTCGGGCAAAAAATGCCGGCTGCTCTCGATG
ATGTGGCTTACGGCGTTCTTCTTCTTCGTGGAGATCATAGTGGGCTATGT
GACCAATTCGATGGCTCTGGTGGCGGATAGTTTCCACATGCTGGGCGACA
TTGCGGCCCTGGTCATATCATTCCTGTCTGTGAAGATGTCACCGAAAAAG
TGGTCAAAGAACACTTTTGGCTGGGCCAGGGCAGAAGTCTTGGGTGCTTT
GGTCAACGCCGTTTTTCTGGTGGCCTTGTGCTTCAGCATCACCATCGAGG
CTTGCAAAAGATTCATTGAGGAGGAGCCGATTCACGAGCCTGAACTGCTT
GTCATCGTGGGAGCCTTGGGTCTTCTGGTGAATGTTATTGGACTTTGTCT
GCTTTACGAGCACGGCGGTCACCATGGACACTCACATGGCGGCGGACTCA
CCCGTAACCACAGCCGCCTCACTGAGTTGGCCAACATGGACGAGGGCGAG
GATGAGCAAAACGACTTTGCCTACGAGAAGCAGAAGGAAAAGGCACCGGT
CAAGAAATCCAGCCATGGACACAGCCATGATCCCGGCCAGATGAATATGC
GCGGCGCCTTCTTGCACGTTTTGAGCGATGCCCTTGGCAGCATCATTGTC
GTAATCAGTGCTGTGGTGGTGTGGAAGACGGAGTGGAAGTACCGGTACTA
CATGGATCCCGCTCTGTCCATCGTTTTGGTTGTTTTGATCCTGCACTCCG
TGTGGCCGCTGCTGCGCGAGTCCGCTTTAATTCTGCTCCAAACGGTGCCC
ACCCACATCCAGGTGGATGCCATTCAGAAGAGGCTTCTGGAGAAAGTTGA
TGGCGTGCTGGCTGTGCACGAGTTCCATGGTGTGGCCACTGGCCGGCGAC
CGCATCATCGCTTCTGCCCATATTAGTGCCGTAACCTTTCGAGTACATGA
GATTGCGAAAGTGAAGGAGTTCTTCCACACGGAGGGTATCACTCTACACC
ATCAGCCAGAGTTCAGCGAGATCGAAGGCTGCCACATGTCCGATGACACT
TTCAGCTTCAACTT
UFO02772.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:24:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ZnT63C-RG | 1959 | CG17723-RG | 146..1207 | 9..1062 | 4925 | 98.1 | Plus |
| ZnT63C-RF | 2033 | CG17723-RF | 220..1281 | 9..1062 | 4925 | 98.1 | Plus |
| ZnT63C-RE | 1955 | CG17723-RE | 142..1203 | 9..1062 | 4925 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:24:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3311885..3312402 | 408..926 | 2515 | 99.4 | Plus |
| 3L | 28110227 | 3L | 3310530..3310706 | 9..185 | 885 | 100 | Plus |
| 3L | 28110227 | 3L | 3310770..3310896 | 184..310 | 620 | 99.2 | Plus |
| 3L | 28110227 | 3L | 3311728..3311827 | 309..408 | 500 | 100 | Plus |
| 3L | 28110227 | 3L | 3312555..3312659 | 961..1062 | 270 | 90.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:24:20 has no hits.
UFO02772.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:08:22 Download gff for
UFO02772.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ZnT63C-RC | 375..1438 | 9..1064 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:59 Download gff for
UFO02772.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ZnT63C-RE | 142..1205 | 9..1064 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:00:23 Download gff for
UFO02772.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ZnT63C-RE | 142..1205 | 9..1064 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:00:23 Download gff for
UFO02772.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3310530..3310706 | 9..185 | 100 | -> | Plus |
| 3L | 3310772..3310896 | 186..310 | 99 | -> | Plus |
| 3L | 3311730..3311827 | 311..408 | 100 | -> | Plus |
| 3L | 3311886..3312402 | 409..925 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:59 Download gff for
UFO02772.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3310530..3310706 | 9..185 | 100 | -> | Plus |
| arm_3L | 3310772..3310896 | 186..310 | 99 | -> | Plus |
| arm_3L | 3311730..3311827 | 311..408 | 100 | -> | Plus |
| arm_3L | 3311886..3312402 | 409..925 | 99 | -> | Plus |
