UFO02775.5prime Sequence
1026 bp (922 high quality bases) assembled on 2009-01-14
> UFO02775.5prime
CAGTCGACATGATAAAAATTAAGCGAAAAACAGCCCCTCCGCCCGTGGAA
CAGGACTCGGACAGCGATTCCAGCTTTGACGAGGAGGAGCCACAGGATTT
GGAAGTCCAGGAGGGGCCAGTCACTGATAGCAGCGATGAAGAAGCCGCCT
CCAGCAGCAAAAAAACGGCCAAACAAGGGGAAGCCAGTGAGGATTTAAAG
GAAGAGGATGATGACGACGATGAGGAGGAGAATGACGACGACGACGAAGA
AGAGGATGATGACGACGACGACGACAAGAAGACACGAATTCCTGTTTTGA
ATCCCCTCAGCTGGATGCGCAACAAGGAGCAGCGTTTGGCGTTGTACAAA
AAAATGAAGAAGGAGAAGCACAAGAAAAAAATGCAGGAGCGCCGTGCCCG
ACGGAAGGCTGGTGTACCCGCCAATCCTGGTCACACCATAGAGAGCCTGC
GAGAGAAGGACCAAACAGAGGTGGCCAATCTGAACGATTCCGACAACGAG
GAGTTGCAAAAGGAACTCCAACTGGACGATTTCAGCTCGTACTTCGAACG
TTCGTACGAGCCAAAGGTGCTGATCACTTTTGCTGACAATCCGGTGACCA
AGACGCGTAAGTTTGGACTGGAGCTTTCGCGCATATTCCCCAACGCCCTG
GTTAAGATTCGCAACAAGTCGTCGGTGAAGAAGATATGCAAAAGCGCCGA
GCGCGAGGAGTTCACAGACGTCGTGATCGTTAACGAAGATCGCAGAAAGC
CCAATGGGCTGCTGGTCATTCATCTGCCCAATGGTCCCACTGCCCCACTT
CAAGCTGTCCAACGTGAAGCTCACTCGGACATAAGCGCGATCACAAGGAG
ATACCAGCACAGGCCCGAAGTGATCCTGACATTTACCACACGTTGGGTCT
GACGTGGGCCGCATGCTGGGTGCCTCTCATCACGATCCGAGTCGCGGCCG
CCGAGCGGTGGACGTCCCATCAGGCGGATACTATTCTCCGTCATCAACGC
TACGAGTCCAGAGGAAGCGGTAAGCT
UFO02775.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:05:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6712-RA | 1336 | CG6712-RA | 92..1109 | 9..1007 | 4485 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:05:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12095497..12096420 | 924..9 | 4185 | 98.6 | Minus |
Blast to na_te.dros performed 2014-11-28 19:05:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tom1 | 410 | Tom1 DMTOM1_LTR 410bp | 54..132 | 371..294 | 109 | 60.8 | Minus |
UFO02775.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:06:57 Download gff for
UFO02775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6712-RA | 91..1073 | 9..976 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:06 Download gff for
UFO02775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6712-RA | 92..1074 | 9..976 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:47:23 Download gff for
UFO02775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6712-RA | 92..1074 | 9..976 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:47:23 Download gff for
UFO02775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12095438..12096420 | 9..976 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:06 Download gff for
UFO02775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12095438..12096420 | 9..976 | 97 | | Minus |
