UFO02776.5prime Sequence
920 bp (810 high quality bases) assembled on 2009-01-14
> UFO02776.5prime
CAGTCGACATGCTGACGCTCCTGGTACTCGTGTTCACCGTCGGACTTCTG
CTATATGTCAAGCTACGCTGGCATTACAGCTACTGGAGCAGAAGGGGCGT
CGCCGGAGAAAGACCCGTGTACTTCCGCGGCAATATGAGTGGGCTGGGAA
GGGACCTTCACTGGACGGATATCAACCTGCGGATCTACCGGAAGTTTCGG
GGAGTGGAGCGCTACTGCGGCTACTTCACTTTTATGACCAAGTCGCTGTT
TATCATGGATCTGGAACTGATCCGCGATATAATGATCAGGGACTTTTCCA
GCTTCGCCGATCGAGGACTCTTCCATAATGTGCGGGACGATCCACTGACC
GGGAACCTTCTCTTCCTGGACGGACCGGAGTGGCGCTGGTTGCGCCAGAA
TTTGACGCAGGTGTTCACCTCCGGCAAGATGAAATTCATGTTCCCCAACA
TGGTGGAGGTGGGCGAGAAGCTAACGCAGGCGTGTCGCCTCCAGGTCGGC
GAGATAGAGGCAAAGGATCTGTGTGCCAGGTTCACCACGGATGTGATCGG
CAGCTGTGCCTTCGGCCTCGAGTGTAATAGTCTCCAGGATCCGGAGTCGC
AGTTCCGGCGAATGGGCCGATCAGTGACCCAGGAGCCCCTGCATTCGGTG
CTCGTCCAGGCCTTTATGTTTGCCCAGCCGGAGTTGGCTAGGAAGCTGCG
CTTCAGCTTTTCGCCCGGAGGTCAGTGAGTTCTTCTAGACACGGTACGCC
AGACATTGGACTACAGCGGCGGGAGAATATTCATCGCAACGAACTGATCC
AACTACTATTGATTGGGTGAGGAGGGAGTAAAGACGCCCTCTCTTCAAGC
AGATTGCGCCAGCATTGTTTCCTTTGCCGGGTCAACACTCCTCACACATG
TCTTCTGCTGATGAGCCTGG
UFO02776.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6a13-RA | 1649 | CG2397-RA | 32..890 | 8..858 | 4030 | 98.5 | Plus |
| Cyp6a14-RE | 2959 | CG8687-RE | 1789..1868 | 513..592 | 190 | 84 | Plus |
| Cyp6a14-RC | 1626 | CR8687-RC | 565..644 | 513..592 | 190 | 84 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8570530..8571388 | 8..858 | 3875 | 98.4 | Plus |
| 2R | 25286936 | 2R | 6780843..6780895 | 577..525 | 190 | 90.6 | Minus |
| 2R | 25286936 | 2R | 8565335..8565414 | 592..513 | 190 | 82.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:13:28 has no hits.
UFO02776.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:06:56 Download gff for
UFO02776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a13-RA | 19..908 | 1..875 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:07:27 Download gff for
UFO02776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a13-RA | 22..911 | 1..875 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:42:05 Download gff for
UFO02776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a13-RA | 22..911 | 1..875 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:42:05 Download gff for
UFO02776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8570520..8571409 | 1..875 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:07:27 Download gff for
UFO02776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4458025..4458914 | 1..875 | 97 | | Plus |
