UFO02779.5prime Sequence
1116 bp (1007 high quality bases) assembled on 2009-01-14
> UFO02779.5prime
CAGTCGACATGGCAACGAAGACGCACACAATGTCCGCGGGGGATGTCCCC
TTGGTGGCGATGGCCAAGGTTCCGCCGACCATTCAGTTTGAGGCCACAAA
GAACTTTCACTCGCACACCGAGCAGAAGGAATTGGACAGTGCTTTCCTGG
GCTACAATCGACGTCCTTGGGTTCGCCAAAAGGCTCACAGGGACACACGC
CGGGAGAGGGAGATCCTCAACGGTCTACTGTGCTCTACCAGCGTGGAAAC
GGACTACGCCAGCACCTGTGTGGACAAACTTATTGCCGAGAACATTAACT
ATCTGGATTTGGCCTCTCTCACCGACGAAGATTTGGAACTCTTCGGGTTC
AAGTGTCGAAAGCAACGGCAACAGCTCCTGGAGATGTTCGAAAAGATTCC
CAACCAGAATCCCAGTTACGAATACATTTGCAACCATCCTGAAGCCGAAA
ACTACAACAATCAGATTCTGGGCAATGCTGGCAACCACTTTATGTCCCTG
CGCGCTTCTTTAGCGGCCACCAACTACAAGCTGCAGGTCTCCACTCCCGA
GGACGTCGTGGTGGGCGACAAACGATATGCCAGCTGCTTTGCCCAGGAAA
CTCTAAAAAGCGTGAATCAGATCACCGAAGAGATTGCCAAGGATCTCGCG
AAAATCGAAGCTAATGCCCAGAACGCAAGGAGCCAGAAGAAAGTGCAGGG
CAACGAGAGTCACAAGAAGAAGAAGTGGAGCCTGTCTACTATTTTGTATT
ACACCACCTTGGCTGTGGGATTTTCGTGCGCCTGGTTCTGGTGGTGGACC
AAGTTCCGCAGCGCTCCCCGACTGGAGCGGATCTCCGTTCAGACTGCAAG
CTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATC
ATAATCATAATCATAATCATAATCACAACTAGCCTAGAGATCCTGGTCAT
GACTAGTGCTTGGATCTCACAATAAAAAACGCCCGCGCAACGAGCGTCTG
AACAATCCAGATGGAAGTCTGAGTCATACTGATCTATCAACAGGAGTCAG
GGGGCTCGATATCAATACGCCCCGCCTGCCACTCATCGAGATACTGTTGT
ATTCAATTAAGCATTC
UFO02779.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:25:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10880-RA | 1285 | CG10880-RA | 87..923 | 9..845 | 4170 | 99.9 | Plus |
| CG10880-RB | 1282 | CG10880-RB | 87..920 | 9..845 | 4115 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:25:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2215515..2216225 | 719..9 | 3555 | 100 | Minus |
| 2L | 23513712 | 2L | 2215334..2215461 | 845..718 | 625 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:25:17 has no hits.
UFO02779.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:06:55 Download gff for
UFO02779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10880-RA | 69..913 | 2..849 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:00:35 Download gff for
UFO02779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10880-RA | 82..926 | 2..849 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:01:01 Download gff for
UFO02779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10880-RA | 82..926 | 2..849 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:01:01 Download gff for
UFO02779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2215330..2215459 | 720..849 | 97 | <- | Minus |
| 2L | 2215515..2216230 | 2..719 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:35 Download gff for
UFO02779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2215330..2215459 | 720..849 | 97 | <- | Minus |
| arm_2L | 2215515..2216230 | 2..719 | 99 | | Minus |
