UFO02781.5prime Sequence
937 bp (846 high quality bases) assembled on 2009-01-14
> UFO02781.5prime
CAGTCGACATGAGCGAGGAATTCAAGCTGCCCAAGCGTTCCCGCAAGCGC
ACACGTGAGGTGAAGCGCAAGGCTCGTCCGGAGCTGGACGGCGAGAATGC
CTGGTCGGCCATGCGGTACTGTGAGAAGTTCGAGCCATTTTGGGATTTCA
CCGATAACCTGGAGCGGATCGAGGAGTCGCAGGTGCCGGAGTCGGAGTTC
ATCGAACGCTTCGAGCGACCCTACAAGCCGGTGGTCATTCGCGGCTGCAC
CGATGGCTGGTTGGCGCTGGAAAAGTGGACACTAGCCCGCCTGGCCAAGA
AGTATCGCAACCAGAAGTTCAAGTGCGGCGAGGACAACGAGGGCTATAGC
GTCAAGATGAAGATGAAGTACTACGTGGAGTACATGCAGAGCACGCGCGA
TGACAGCCCGCTGTACATCTTCGACAGCAGCTTCGGCGAACACCATCGTC
GGCGCAAGCTCCTGGATGACTATGTGGTGCCCAAGTATTTTCGCGACGAC
CTCTTCCAGTACTGCGGCGAGAATCGTCGTCCGCCTTACCGCTGGTTTGT
CATGGGACCGGCTCGCTCCGGCACCGGCATCCACATTGATCCACTGGGCA
CTAGTGCCTGGAACACGCTGATCCGCGGCCACAAGCGCTGGTGCCTGTTC
CCCACCCAAACGCCCCAAGGAGCTGCTCAAGGTCACCAGTGCCATGGGTT
GGCAAGCAGCGAGACGAGGCCATCACCTGGTTCAGCACCATATATCCGCG
CACCCAGCTGCCTAGTTGGCCGGAGCAATACCGCCCCATCGAGTGCTGGC
AGGAGCAGGCGAGACTGTATTCGTGCCCGGCGCTTGGTGGCACGTGGTGC
TCACAATGGAAGACCCATTGGCATCACCAAAATTTCAGTCGAGAAGAATT
CCCCTTGCGTTGGCACAAGACTGGTTCGCGCCCGGCC
UFO02781.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:20:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| PSR-RB | 1590 | CG5383-RB | 77..1008 | 9..937 | 4210 | 97.5 | Plus |
| PSR-RA | 1590 | CG5383-RA | 77..1008 | 9..937 | 4210 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:20:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22361426..22362295 | 878..9 | 4025 | 98.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:20:51 has no hits.
UFO02781.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:06:53 Download gff for
UFO02781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PSR-RA | 232..1082 | 1..853 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:40 Download gff for
UFO02781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PSR-RA | 70..920 | 1..853 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:32 Download gff for
UFO02781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PSR-RA | 70..920 | 1..853 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:32 Download gff for
UFO02781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22361452..22362299 | 1..853 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:40 Download gff for
UFO02781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18187174..18188021 | 1..853 | 98 | | Minus |
