UFO02795.5prime Sequence
803 bp (671 high quality bases) assembled on 2009-01-14
> UFO02795.5prime
CAGTCGACATGGGAAAATTCGAATACTCACTGGGTCTCAATGAGCTCAAA
TCCAAGGAGCTGCGATTGTGGCAGGCCTTGATTGGAGAATTCCTTGGCAA
TTTGATCCTCAATTTCTTTGCCTGCGGCGCATGCACCCAAATTGAGGATG
GCACCTTCAAGGCCTTGGCTTTTGGCCTGGCTATCTTCATGGCCATCACG
ATTGTGGGCCACTTGAGTGGTGGTCATGTGAATCCTGCCGTTACCGCTGG
AATGTTGGTCGCAGGACGAATTAGCTTGATCAGAGCCTTTTTCTATGTGG
TTTTCCAGTGCTTGGGTGCAATTGCCGGAACTGCAGCGGTTAAGATTCTC
ATCGATCAGGACTATTACAATGGCCTGGGTCACACCTCTCTGGCGCCCAA
TATCACCGAGCTGCAGGGCCTGGGAATCGAGTTCTTCCTGGGACTCCTGC
TGGTGCTCGTCGTCTTTGGGGCCTGTGATCCCCACAAGCCCGATTCCCGC
TACACGGCGCCCTTGGCCATCGGAATGGCGGTGACCCTGGGTCACTTGGG
CACCATCCGCTACACCGGGGCCAGCATGAATCCCGCTCGCAACGTGGGCA
CCGCCTTTGCCACCGACATCTGGCGTCGCATTGGGTATACTGGGTGGGAC
CTGTGCTGGGGGGCGTGCTGCCGCCCTTCTTCTACACCCAAGTCCTGGAG
GCGAAGCCCGTGCCCAAGTTTAACAAGGCTCTCAAAAGTACCGAAACCCC
CCGATGAACCGAGGTGAGAATCAGGTTGATAACGCCTGAAACAGAGATCC
CTC
UFO02795.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:48:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7777-RB | 1386 | CG7777-RB | 216..1000 | 9..788 | 3560 | 97.5 | Plus |
| CG7777-RC | 1479 | CG7777-RC | 216..975 | 9..764 | 3475 | 97.6 | Plus |
| CG7777-RD | 1388 | CG7777-RD | 216..969 | 9..759 | 3470 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:48:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11441066..11441509 | 343..782 | 1730 | 95.7 | Plus |
| 2R | 25286936 | 2R | 11439968..11440125 | 43..200 | 790 | 100 | Plus |
| 2R | 25286936 | 2R | 11440186..11440330 | 200..344 | 725 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:48:24 has no hits.
UFO02795.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:06:52 Download gff for
UFO02795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7777-RB | 208..1004 | 2..796 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:40:32 Download gff for
UFO02795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7777-RB | 211..1007 | 2..796 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:41:22 Download gff for
UFO02795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7777-RB | 211..1007 | 2..796 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:41:22 Download gff for
UFO02795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11439970..11440125 | 45..200 | 100 | -> | Plus |
| 2R | 11440187..11440330 | 201..344 | 100 | -> | Plus |
| 2R | 11441068..11441523 | 345..796 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:40:32 Download gff for
UFO02795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7327475..7327630 | 45..200 | 100 | -> | Plus |
| arm_2R | 7327692..7327835 | 201..344 | 100 | -> | Plus |
| arm_2R | 7328573..7329028 | 345..796 | 94 | | Plus |
