UFO02802.5prime Sequence
959 bp (920 high quality bases) assembled on 2009-02-18
> UFO02802.5prime
CAGTCGACATGTCGCTTCTGGAGCAATACGAACAGCAATACGCCACGTTA
ATAGCAGAAATAACGGCCCATATTGGACGGCTGCAGCAGCAAAACAACAA
CAGCGAGCGCCATGATTTGTGCAGCAAGATCGACTCCAGTTTGCCCGAGG
CTCAGGAATTGCTGGAGCAGATGGGTCTGGAGGTGAGGGAGCTAAATCCT
GGACTGCGGAGCAGCTTCAACGGAAAGCTGCAGGTGGCCCAGGCAGAACT
GAAACGGCTGCAGGCGGAGTACAGGTTGACCAAGGACAAACAGCGCTCCC
AAGCCAACACATTCACCACTCTGGACTTGGGTGACAGCTATGAGGATGTG
TCCATAAGTACAGATCAACGCCAACGCCTCTTGGACAACTCGGAAAGGAT
TGAACGGACGGGCAACAGGTTAACCGAAGGGTACAGAGTGGCCTTGGAGA
CGGAGCAACTGGGCGCCCAGGTCCTAAATGATCTGCACCACCAAAGGGAA
ACTCTACAGGGAGCCAGGGCTCGACTTCGAGAAACCAATGCCGAGCTGGG
AAGAGCTTCTCGCACTCTGAATACCATGATGTTAAGAGCCCTGCGGGAGA
AGGTGGTCTTGTATGGGAGTGGGTGTCTGCTTTGTGGTGGCCGTGGGCGT
CAGTCTCTATCTGACCTTCGCACCCAGTTCAAGCAGCACCGCCTCGTCGG
CAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCAT
AATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTG
GTCATGACTAGTGGTTTGGATCCCCACCAATAAAAACGCCCGGCGGCAAC
CGAGCGTTCTGACAAATCCAAATGGAGTCTGAGGTCATTACTGGATCCTT
CAACTGGAGTCCAAGCGAGCTCGATAACAAATACTGCCCCGCCCTGCCCA
TCATCGCAG
UFO02802.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:22:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vti1-RA | 1370 | CG3279-RA | 142..831 | 9..699 | 3430 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:22:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 692025..692620 | 699..103 | 2935 | 99.8 | Minus |
| 3L | 28110227 | 3L | 692670..692778 | 117..9 | 485 | 96.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:22:34 has no hits.
UFO02802.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:02:27 Download gff for
UFO02802.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3279-RA | 133..827 | 1..699 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:41 Download gff for
UFO02802.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vti1-RA | 137..831 | 1..699 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:59:22 Download gff for
UFO02802.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vti1-RA | 137..831 | 1..699 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:59:22 Download gff for
UFO02802.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 692025..692620 | 103..699 | 99 | <- | Minus |
| 3L | 692685..692783 | 1..102 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:41 Download gff for
UFO02802.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 692025..692620 | 103..699 | 99 | <- | Minus |
| arm_3L | 692685..692783 | 1..102 | 96 | | Minus |
