UFO02805.5prime Sequence
1073 bp (1024 high quality bases) assembled on 2009-02-18
> UFO02805.5prime
CAGTCGACATGAAGGTGAAAATGATTAGTCGCAATCCGGATAACTATGTC
CGAGAAACCAAACTGCAACAGCACAAAATGCCCAGGAACTACGATCCTTC
GCTGCATCCTTTGGAGGGTCCCAGGGAATACGTGCGTGCCCTGAATGCCA
CCAAGTTGGATCGAGTATTTGCCAAACCCTTCGTCTGCAATTTGAGCGGG
CATCGCGATGGAGTCTCCTGCTTCGGAAAGCATCCCAAGCAACTTTCCAC
CTTGGCCACCGGCGCCTATGACGGCGAAGTGCGCATTTGGGACTTGGCGA
ATCGTATCAGCTCTCGGAACTTTGTGGCCCACGACGGTTTCGTTCGCGGC
ATTGCTTACACCCAGAACGGAGGTCGCATTTTCACCGTGGGAGATGATAA
AACCATCAAGGTTTGGAAAGCAGAGGCTCCGGAAGTCGGCGAGGATGAGG
TGCCGGTGAACACTATACTGAGTAAATTTGGACTGCACGGCATCTCGCAC
AATCGCAGGGATAACAAGTTCGCCACCTGTGGCGAGGTATGCGCCATTTG
GGACGAAAGGCACAACGATCCTTTGAAGACATTGAAGTGGGGCGTCGATA
CCCTTCACACCATATCCTATAACCCCGTGGAAACAAGCATCCTGGCGTGC
TGTGCCAGCGATCGCAGCATTATCCTGTACGATCAGAGAGAGGCGCAGCC
ACTAAAGAAGGTCGTCCTAACCATGAAGAGCAACAAGCTCGCGTGGAATC
CCATGGAGGCGTTCAACTTCACAGTGGCCAACGAGGATTGCAACCTTTAT
ACCTTTGACACTCGCAAGCTGCAAACGCCGCTGAAGGTTCACTTTGACCA
TGTTTCCGCTGTCACCGATGTTGACTACTCGCCCACTGGCAAGGAATTCG
TCTCGGCCAGCTACGACAGACCATTCGGATCTACAATGCCCACCACAGTC
ACTCGCGGGATATTACCACACAAACGCATGCAGCATGTGGTCTGCGTGCC
TGATTCCTCAATAATCGAAACGTTTCTCTCGCTCCGACGAATTGACGTCC
GCTGTGTGAAGGCGAATGCCTCC
UFO02805.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:29:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7275-RA | 1495 | CG7275-RA | 102..1172 | 9..1073 | 5040 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:29:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15499182..15499896 | 79..793 | 3560 | 99.9 | Plus |
| 3L | 28110227 | 3L | 15499953..15500238 | 794..1073 | 950 | 93.7 | Plus |
| 3L | 28110227 | 3L | 15499060..15499129 | 9..78 | 350 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:29:16 has no hits.
UFO02805.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:02:24 Download gff for
UFO02805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7275-RA | 89..1167 | 1..1073 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:49 Download gff for
UFO02805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7275-RA | 94..1172 | 1..1073 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:03 Download gff for
UFO02805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7275-RA | 94..1172 | 1..1073 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:11:03 Download gff for
UFO02805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15499052..15499129 | 1..78 | 94 | -> | Plus |
| 3L | 15499182..15499896 | 79..793 | 99 | -> | Plus |
| 3L | 15499953..15500238 | 794..1073 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:49 Download gff for
UFO02805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15493053..15493338 | 794..1073 | 94 | | Plus |
| arm_3L | 15492152..15492229 | 1..78 | 94 | -> | Plus |
| arm_3L | 15492282..15492996 | 79..793 | 99 | -> | Plus |
